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AT5G46340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.928
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-acetyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-acetyltransferase family protein; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.-eggNOG:ENOG410XPE6eggNOG:KOG1699EMBL:AB010698
EMBL:AF424606EMBL:AY136339EMBL:CP002688EnsemblPlants:AT5G46340
EnsemblPlants:AT5G46340.1entrez:834677GeneID:834677Genevisible:Q8L7C8
GO:GO:0000139GO:GO:0005794GO:GO:0009834GO:GO:0016021
GO:GO:0016491GO:GO:0016740GO:GO:0045491GO:GO:0045492
Gramene:AT5G46340.1hmmpanther:PTHR13533hmmpanther:PTHR13533:SF11HOGENOM:HOG000265401
InterPro:IPR012419iPTMnet:Q8L7C8KEGG:ath:AT5G46340OMA:YICDRTE
PaxDb:Q8L7C8Pfam:PF07779PhylomeDB:Q8L7C8Proteomes:UP000006548
RefSeq:NP_568662.1STRING:3702.AT5G46340.1TAIR:AT5G46340TMHMM:TMhelix
UniGene:At.26300UniProt:Q8L7C8
Coordinates (TAIR10) chr5:-:18796361..18799725
Molecular Weight (calculated) 63339.80 Da
IEP (calculated) 8.53
GRAVY (calculated) 0.26
Length 540 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDPGPITPG QVSFLLGVIP IFVGWIYSEL LEYRKSWVPL KPHSDNNLVE LGDVAEKDDD KADLLEGGLA RSPSVKFHNS SIRTNIIRFL SMEDSFLLEH
101: RATLRAMSEF GAILIYFYIC DRTELLGDST KNYNRDLFLF LYVLLIIVSA MTSLRKHNDK SPISGKSILY LNRHQTEEWK GWMQVLFLMY HYFAAAEIYN
201: AIRIFIAAYV WMTGFGNFSY YYVRKDFSVA RFAQMMWRLN FFVAFCCIVL NNDYMLYYIC PMHTLFTLMV YGALGIFSKY NEIGSVMALK IFSCFLVVFL
301: LWEIPGAFEI FWGPLTFLLG YNDPAKPDLH RLHEWHFRSG LDRYIWIIGM IYAYYHPTVE RWMEKLEDCE TKKRLSIKAA IVTITVLVGY VWYECIYKLD
401: RTSYNMYHPY TSWIPITVYI CLRNFTHQLR SVSLTLFAWL GKITLETYIS QFHIWLRSNM PDGQPKWLLS IIPGYPMLNF MLTTAIYVLV SHRLFELTNT
501: LKTVFVPTKD NKRLFSNFIA GIAIALPLYC FSFVLLQIHR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)