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AT5G45440.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.783
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G45490.2); Has 3890 Blast hits to 3878 proteins in 196 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 8; Plants - 3872; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:834580eggNOG:ENOG410J026eggNOG:ENOG410YKJEEMBL:AK227575
EnsemblPlants:AT5G45440EnsemblPlants:AT5G45440.1entrez:834580ExpressionAtlas:Q0WTI0
Gene3D:3.40.50.300GeneID:834580GO:GO:0043531Gramene:AT5G45440.1
hmmpanther:PTHR23155hmmpanther:PTHR23155:SF496InterPro:IPR002182InterPro:IPR027417
KEGG:ath:AT5G45440OMA:MTQEDSSPaxDb:Q0WTI0Pfam:PF00931
Pfam:Q9FHJ2PhylomeDB:Q0WTI0PRIDE:Q0WTI0ProteinModelPortal:Q0WTI0
RefSeq:NP_199357.1SMR:Q0WTI0STRING:3702.AT5G45440.1SUPFAM:SSF52540
TAIR:AT5G45440UniGene:At.30013UniGene:At.74286UniProt:Q0WTI0
UniProt:Q9FHJ2
Coordinates (TAIR10) chr5:-:18412426..18413466
Molecular Weight (calculated) 39448.30 Da
IEP (calculated) 4.98
GRAVY (calculated) -0.73
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MTQEDSSRGL TSVGRVDFTN RFADRYNEWL GTTGDETKQV EDRVETDSGL PGHDIYGFEN EIKSLQHFLL DQKSYKLFKS LVVVGEYGVG KTALCQQIFN
101: DYDVRNAYAP RIWVSMHSNE SKEGLDGKIC VLKTILKGLG VEESMFESIH REVVEEVSNR QEAGEIDGET AKEKEISALL YALHLNLRWK KYLIVFDDVQ
201: EIDNWDEKLD AKLNEGEKWG KYLSDGFPKG SGGRVIYTTR DENLAKNLVV QKHEIHRLWP LSDSNSVWKI YEAMIQKREK ESPRNDKKCI DELMNKSRGL
301: PLAARLLAEL DPMLFDDGKA NQNGSKDGKT DSVDNPNSEE SKTKPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)