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AT5G41240.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 0.962
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase THETA 2
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase THETA 2 (GSTT2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 8972 Blast hits to 8892 proteins in 1087 species: Archae - 0; Bacteria - 3943; Metazoa - 1934; Fungi - 336; Plants - 1045; Viruses - 4; Other Eukaryotes - 1710 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G41240-MONOMEREC:2.5.1.18eggNOG:COG0625eggNOG:KOG0867
EMBL:AB019225EMBL:AJ132398EMBL:AY139996EMBL:BT008361
EMBL:CP002688EnsemblPlants:AT5G41240EnsemblPlants:AT5G41240.1entrez:834125
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:834125Genevisible:Q8L727
GO:GO:0004364GO:GO:0005737GO:GO:0005777GO:GO:0006749
GO:GO:0009407GO:GO:0009636Gramene:AT5G41240.1hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF220HOGENOM:HOG000148624InParanoid:Q8L727InterPro:IPR004045
InterPro:IPR010987InterPro:IPR012336InterPro:IPR017877KEGG:ath:AT5G41240
PaxDb:Q8L727Pfam:PF02798Pfam:PF14497Pfam:Q8L727
Pfscan:PS50090Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q8L727
PIR:T52580PRIDE:Q8L727PRO:PR:Q8L727PROSITE:PS50090
PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q8L727Proteomes:UP000006548
Reactome:R-ATH-156590RefSeq:NP_198940.3SMR:Q8L727STRING:3702.AT5G41240.1
SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT5G41240tair10-symbols:ATGSTT2
tair10-symbols:GST10Btair10-symbols:GSTT2UniGene:At.22919UniProt:Q8L727
Coordinates (TAIR10) chr5:-:16498293..16500811
Molecular Weight (calculated) 67692.90 Da
IEP (calculated) 9.72
GRAVY (calculated) -0.67
Length 591 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLKVYADRM SQPSRAVLIF CKVNEIQFDE ILISLGKRQQ LSPEFKEINP MGKVPAIVDG RLKLFESHAI LIYLSSAYAS VVDHWYPNDL SKRAKIHSVL
101: DWHHTNLRPG ASGYVLNSVL APALGLPLNP KAAAEAENIL TNSLSTLETF WLKGSAKFLL GGKQPSIADL SLVCELMQLQ VLDDKDRLRL LSPHKKVEQW
201: IESTRKATMP HSDEVHEVLF RAKDRFQKQR EMATASKPGP QSKIIQFSSI GGTSDGPNLV QDTTDRKARR RKWSPPDDVI LISAWLNTSK DRKVVVYDEQ
301: QAHTFWKRIG AHVSNSASLA NLPKREWNHC RQRWRKINDY VCKFVGCYDQ ALNQRASGQS EDDVFQVAYQ LYYNNYMSNF KLEHAWRELR HNKKWCSTYT
401: SENSKGGGSS KRTKLNGGGV YSSSCNPESV PIALDGEEQV MDRPLGVKSS KQKEKKVATK TMLEEREADS RSRLENLWVL DEEEQVMDLP LGVKSSKQKE
501: RKVATKTMIE EREAANFRSR LGNLWLLKEK EEREADSRSR LENLWALKEK DIEEQKKLTR MEVLKSLLGR RTGETSEKEE TLKNKLIDEM L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)