AT5G38720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:15508417..15510472 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35360.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.55 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.40 | ||||||||||||||||||||||||||||
| Length | 306 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKETRKLKKS NLPKEETVGK KIQRKKNEKV SNVELSEDPQ AAQLQAKSSE KPNRKKIQKG KEIKSSPADG KLSGKMKKRK EKVGNVDISE PILEAISTEK 101: VKEKKGKMNK TKKKRKAEEI TRSSVEDLKR ESKFKKSNKK KKMDMTSKKE NKIEEEEDVY QISSGDEDCT RGMKKWVSDY YEGRPGLDEL QKRIDDFMTA 201: HEERLEQEKQ DKEAKAAEGG WTVVVHHKGR KKTTESETGT AVGSFSQAAL EDKIAKKKQS EPVAHGFYRF QRRDAQRNEL LALQSKFEED KKRIQQLRAA 301: RRFKPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)