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AT5G37380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20231 Blast hits to 19941 proteins in 3237 species: Archae - 147; Bacteria - 8602; Metazoa - 3333; Fungi - 1703; Plants - 2044; Viruses - 29; Other Eukaryotes - 4373 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:ENOG410IFY6EMBL:AB017069EMBL:AY052284
EMBL:BT002688EMBL:CP002688EnsemblPlants:AT5G37380EnsemblPlants:AT5G37380.1
EnsemblPlants:AT5G37380.2EnsemblPlants:AT5G37380.3EnsemblPlants:AT5G37380.4EnsemblPlants:AT5G37380.5
entrez:833712Gene3D:1.10.287.110GeneID:833712Gramene:AT5G37380.1
Gramene:AT5G37380.2Gramene:AT5G37380.3Gramene:AT5G37380.4Gramene:AT5G37380.5
hmmpanther:PTHR24078hmmpanther:PTHR24078:SF208HOGENOM:HOG000152475InterPro:IPR001623
KEGG:ath:AT5G37380ncoils:CoilOMA:PPAQKTNPfam:PF00226
Pfscan:PS50076PhylomeDB:Q9FHS7PRINTS:PR00625PROSITE:PS50076
Proteomes:UP000006548RefSeq:NP_001078673.1RefSeq:NP_001119323.1RefSeq:NP_001119324.1
RefSeq:NP_198554.1RefSeq:NP_851102.1SMART:SM00271SMR:Q9FHS7
STRING:3702.AT5G37380.1SUPFAM:SSF46565TAIR:AT5G37380UniGene:At.22867
UniProt:Q9FHS7
Coordinates (TAIR10) chr5:-:14817035..14818330
Molecular Weight (calculated) 48255.80 Da
IEP (calculated) 10.55
GRAVY (calculated) -1.01
Length 431 amino acids
Sequence (TAIR10)
(BLAST)
001: MECNKDEATR AKEIAENKFK MKDIAGAKKF ALKAQNLYPE IEGVSQMLAT LDVYIAAENK VNEDVDWYGI LNASPRDDDE TLKRKYRKLA LMLHPDKNKS
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)