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AT5G37010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins in 486 species: Archae - 7; Bacteria - 485; Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50; Other Eukaryotes - 1741 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ITEHeggNOG:ENOG410YEX1EMBL:AB024026EMBL:AK117147
EMBL:BT005943EMBL:CP002688EnsemblPlants:AT5G37010EnsemblPlants:AT5G37010.1
entrez:833671GeneID:833671Gramene:AT5G37010.1hmmpanther:PTHR34367
hmmpanther:PTHR34367:SF1HOGENOM:HOG000083156KEGG:ath:AT5G37010OMA:ANDKCSV
PhylomeDB:Q9FGV2Proteomes:UP000006548RefSeq:NP_198517.2STRING:3702.AT5G37010.1
TAIR:AT5G37010UniGene:At.30521UniProt:Q9FGV2
Coordinates (TAIR10) chr5:-:14620853..14622879
Molecular Weight (calculated) 69199.70 Da
IEP (calculated) 10.28
GRAVY (calculated) -0.99
Length 637 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCCLSKNPP QASSSSLIDG SCSVKSPDLN KSAIDTPLKL EAQEKKIQVE ESKPRNEEEK IQEDNNSKPR KEVFVIKHRR SHEKSSKTTT DPEDSSVSDV
101: KSTGSNHNPV DVDAILIQCG RLSRSNSAAA KTRRYSGSKR SFDFDQNGGD ADAEDGGEDE EAERRIHRQR QRGGESPRER RRRTPSRERD DSKSNRSGSR
201: ERGSSGNGGG SRRVSRSPGR RSEINPNSSG NSVNSSNNNR PGKFVSVPAT DKALSNNNGD GSVKRITVKR NVGKAASPRS QSPARAASQP SPSKLSRKTE
301: HSPYRRNPLS EIDPNSVAFP LSQGDKLGSG NNIRMMNRDN ENQGLVKESG TFVAQKLNPV MNTKTVTQAP IRRTASPSRA IKEQQEAVEE CKIVVSSGTE
401: LAKPQIVSRS RSLRKSRDFD FSPEALLSNN IDINNVNSNN ATAGSTFPSY TALLLEDIQN FHQKSVNVSA LSSSMSKACS IVEAVADLNS ATNQHQRTEV
501: SFTSAAAKKA DLMEPSFEKY VTVKRGGSSL DDMEEQESSG SNSFTGSSCV VQRQGYSSSS SWEPNSAEST DRVSMRSSNK QERDRSPLGV NYEKQEFDPL
601: KKNGVGVGRK RVAVVDSSSS GKGVLQATTT RVAAVSM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)