AT5G37010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins in 486 species: Archae - 7; Bacteria - 485; Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50; Other Eukaryotes - 1741 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14620853..14622879 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 69199.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.28 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.99 | ||||||||||||||||||||||||
| Length | 637 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCCLSKNPP QASSSSLIDG SCSVKSPDLN KSAIDTPLKL EAQEKKIQVE ESKPRNEEEK IQEDNNSKPR KEVFVIKHRR SHEKSSKTTT DPEDSSVSDV 101: KSTGSNHNPV DVDAILIQCG RLSRSNSAAA KTRRYSGSKR SFDFDQNGGD ADAEDGGEDE EAERRIHRQR QRGGESPRER RRRTPSRERD DSKSNRSGSR 201: ERGSSGNGGG SRRVSRSPGR RSEINPNSSG NSVNSSNNNR PGKFVSVPAT DKALSNNNGD GSVKRITVKR NVGKAASPRS QSPARAASQP SPSKLSRKTE 301: HSPYRRNPLS EIDPNSVAFP LSQGDKLGSG NNIRMMNRDN ENQGLVKESG TFVAQKLNPV MNTKTVTQAP IRRTASPSRA IKEQQEAVEE CKIVVSSGTE 401: LAKPQIVSRS RSLRKSRDFD FSPEALLSNN IDINNVNSNN ATAGSTFPSY TALLLEDIQN FHQKSVNVSA LSSSMSKACS IVEAVADLNS ATNQHQRTEV 501: SFTSAAAKKA DLMEPSFEKY VTVKRGGSSL DDMEEQESSG SNSFTGSSCV VQRQGYSSSS SWEPNSAEST DRVSMRSSNK QERDRSPLGV NYEKQEFDPL 601: KKNGVGVGRK RVAVVDSSSS GKGVLQATTT RVAAVSM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)