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AT5G36950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DegP protease 10
Curator
Summary (TAIR10)
Encodes a putative DegP protease.
Computational
Description (TAIR10)
DegP protease 10 (DegP10); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 3 (TAIR:AT1G65630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:3.4.21.-eggNOG:COG0265eggNOG:KOG1320EMBL:AB016877
EMBL:AY069888EMBL:BT015174EMBL:CP002688EnsemblPlants:AT5G36950
EnsemblPlants:AT5G36950.1entrez:833665Gene3D:2.30.42.10GeneID:833665
Genevisible:Q9FIV6GO:GO:0004252GO:GO:0005759Gramene:AT5G36950.1
hmmpanther:PTHR22939hmmpanther:PTHR22939:SF87HOGENOM:HOG000239474InParanoid:Q9FIV6
InterPro:IPR001478InterPro:IPR001940InterPro:IPR009003KEGG:ath:AT5G36950
MEROPS:S01.A04OMA:MNSLELGPaxDb:Q9FIV6Pfam:PF13180
Pfam:PF13365Pfam:Q9FIV6PhylomeDB:Q9FIV6PRIDE:Q9FIV6
PRINTS:PR00834PRO:PR:Q9FIV6ProteinModelPortal:Q9FIV6Proteomes:UP000006548
RefSeq:NP_568543.1SMR:Q9FIV6STRING:3702.AT5G36950.1SUPFAM:SSF50156
SUPFAM:SSF50494TAIR:AT5G36950tair10-symbols:DegP10UniGene:At.28439
UniProt:Q9FIV6
Coordinates (TAIR10) chr5:+:14594992..14598216
Molecular Weight (calculated) 64729.70 Da
IEP (calculated) 8.12
GRAVY (calculated) -0.15
Length 586 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLRSFRTVE LLRRISTSSV SGYRTSPSLL QRCNGFQSYL PHRVTTTESP FPSHISRFCS SQSANSQNEN RHTTLSSPVS SRRVNNRKIS RRRKAGKSLS
101: ISPAADAVDL ALDSVVKIFT VSTSPSYFLP WQNKSQRESM GSGFVISGRK IITNAHVVAD HSFVLVRKHG SSIKHRAEVQ AVGHECDLAI LVVDSEVFWE
201: GMNALELGDI PFLQEAVAVV GYPQGGDNIS VTKGVVSRVE PTQYVHGATQ LMAIQIDAAI NPGNSGGPAI MGNKVAGVAF QNLSGAENIG YIIPTPVIKH
301: FINGVEECGK YIGFCSMGVS CQPMENGELR SGFQMSSEMT GVLVSKINPL SDAHKILKKD DVLLAFDGVP IANDGTVPFR NRERITFDHL VSMKKPDETA
401: LVKVLREGKE HEFSITLRPL QPLVPVHQFD QLPSYYIFAG FVFVPLTQPY LHEYGEDWYN TSPRTLCHRA LKDLPKKAGQ QLVIVSQVLM DDINTGYERL
501: AELQVNKVNG VEVNNLRHLC QLIENCNTEK LRIDLDDESR VIVLNYQSAK IATSLILKRH RIASAISSDL LIEQNLETEL ASCSAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)