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AT5G36940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24709150 (2014): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cationic amino acid transporter 3
Curator
Summary (TAIR10)
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.
Computational
Description (TAIR10)
cationic amino acid transporter 3 (CAT3); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, N-terminal protein myristoylation, transmembrane transport; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 2 (TAIR:AT1G58030.1); Has 38084 Blast hits to 35759 proteins in 2388 species: Archae - 606; Bacteria - 30262; Metazoa - 2092; Fungi - 3272; Plants - 541; Viruses - 0; Other Eukaryotes - 1311 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0531eggNOG:KOG1286EMBL:AB016877EMBL:AK117747
EMBL:CP002688EnsemblPlants:AT5G36940EnsemblPlants:AT5G36940.1entrez:833664
GeneID:833664Genevisible:Q8GYB4GO:GO:0005635GO:GO:0005783
GO:GO:0015179GO:GO:0015297GO:GO:0015807GO:GO:0016021
GO:GO:0031966GO:GO:1902475Gramene:AT5G36940.1hmmpanther:PTHR11785
hmmpanther:PTHR11785:SF411HOGENOM:HOG000250623InParanoid:Q8GYB4InterPro:IPR002293
InterPro:IPR029485KEGG:ath:AT5G36940OMA:TILARHQPANTHER:PTHR11785
PaxDb:Q8GYB4Pfam:PF13520Pfam:PF13906Pfam:Q8GYB4
PhylomeDB:Q8GYB4PRIDE:Q8GYB4PRO:PR:Q8GYB4ProteinModelPortal:Q8GYB4
Proteomes:UP000006548Reactome:R-ATH-352230RefSeq:NP_198510.2SMR:Q8GYB4
STRING:3702.AT5G36940.1TAIR:AT5G36940tair10-symbols:CAT3TMHMM:TMhelix
UniGene:At.30527UniProt:Q8GYB4
Coordinates (TAIR10) chr5:+:14590330..14594137
Molecular Weight (calculated) 65288.60 Da
IEP (calculated) 7.87
GRAVY (calculated) 0.68
Length 609 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCLRSLVRR KQFDSSNGKA ETHHHHQQLA KALTFPHLIA IGVGSTIGAG VYILVGTVAR EHSGPALALS FLIAGISAAL SAFCYAELSS RFPSAGSAYH
101: YSYICIGEGV AWLIGWALIL EYTIGGSTVA RGISPNLAMI FGGEDCLPTI LARHQIPGLD IVVDPCAAVL VFIVTGLCCL GVKESTFAQG IVTTANVFVM
201: IFVIVAGSYL CFKTGWVGYE LPTGYFPYGV DGMLTGSATV FFAYIGFDTV ASMAEEVKNP RRDLPLGIGI SLLLCCLLYM MVSVVIVGLV PYYAMDPDTP
301: ISSAFSSHGI QWAAYLINLG AVMALCSALM GSILPQPRIL MAMARDGLLP SYFSYVNQRT QVPINGTITT GVCAAILAFF MDVSQLAGMV SVGTLVAFTM
401: VAISLLIVRY VVPPDEVPLP SSLQENSSSH VGTSIRSKQP LLGKVDDSVV DKENAPGSWV LNKKNRRKFA GWSIMFTCIG NFLLSYAASS FLLPGLLRYS
501: LCGVGGLFLL VGLIVLICID QDDARHSFGH SGGFICPFVP LLPIVCILIN MYLLVNLGAA TWVRVSVWLF LGVVVYIFYG RRNSSLVNAV YVSTAHLQEI
601: RRTSGHSLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)