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AT5G35320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J24JeggNOG:ENOG410YMVFEMBL:AB025636EMBL:AF058826
EMBL:AY074341EMBL:AY117159EMBL:CP002688EnsemblPlants:AT5G35320
EnsemblPlants:AT5G35320.1entrez:833486GeneID:833486Gramene:AT5G35320.1
hmmpanther:PTHR35510HOGENOM:HOG000272695KEGG:ath:AT5G35320OMA:TYSQSIG
PhylomeDB:O65233PIR:T01175Proteomes:UP000006548RefSeq:NP_198382.1
STRING:3702.AT5G35320.1TAIR:AT5G35320UniGene:At.1661UniProt:O65233
Coordinates (TAIR10) chr5:+:13521893..13523144
Molecular Weight (calculated) 25994.10 Da
IEP (calculated) 4.12
GRAVY (calculated) -0.78
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MEENERLSMK RKDIDRVNDD FSDFSLSSPA RKIRRLDVDL PPIMEEEEID LPMQDTVAEE IELEPVNDER AIVLFKPLHY HQPSSGNVFV DRHLISGFKN
101: RFLRDVSIAD DNQYEDERLN KCQAVVCWNP SQSTYSQSIG TFQQPRTLEI TELDETGEDV VMDDASNEIE EDTGSTSLSF PQQGQQQEQE HTYGFGLHPW
201: QQAQNCMIPQ LPQVSTTPTP ITWFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)