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AT5G28510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.502
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 24
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 24 (BGLU24); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G09260.1); Has 11366 Blast hits to 11018 proteins in 1472 species: Archae - 140; Bacteria - 7863; Metazoa - 718; Fungi - 202; Plants - 1442; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G28510-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723
eggNOG:KOG0626EMBL:AF262043EMBL:CP002688EnsemblPlants:AT5G28510
EnsemblPlants:AT5G28510.1entrez:832944Gene3D:3.20.20.80GeneID:832944
Genevisible:Q9LKR7GO:GO:0005788GO:GO:0005975GO:GO:0008422
Gramene:AT5G28510.1hmmpanther:PTHR10353hmmpanther:PTHR10353:SF37HOGENOM:HOG000088630
InParanoid:Q9LKR7InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR033132KEGG:ath:AT5G28510KO:K01188OMA:IIMENGY
PANTHER:PTHR10353PaxDb:Q9LKR7Pfam:PF00232Pfam:Q9LKR7
PhylomeDB:Q9LKR7PRIDE:Q9LKR7PRINTS:PR00131PRO:PR:Q9LKR7
PROSITE:PS00014PROSITE:PS00653ProteinModelPortal:Q9LKR7Proteomes:UP000006548
RefSeq:NP_198203.1scanprosite:PS00653SMR:Q9LKR7STRING:3702.AT5G28510.1
SUPFAM:SSF51445TAIR:AT5G28510tair10-symbols:BGLU24UniGene:At.30739
UniGene:At.47576UniProt:Q9LKR7
Coordinates (TAIR10) chr5:-:10481041..10484022
Molecular Weight (calculated) 61037.30 Da
IEP (calculated) 7.62
GRAVY (calculated) -0.54
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLQKLPLMS IGLLWLLIIV GPLVNADGPV CPPKPSDKLS RAHFPKGFLF GTATAAYQVE GAVNETCRGP SVWDIYCKKY PEKCNGDNGT QAVDFFYRYK
101: EDIQLMKNLN TDSFRLSISW TRIFPHGREE NGVSKSGVQF YHDLIDELKR NGIIPFVTVF HWDTPQTLEN EYGGFLSAHI VKDFREYAEF VFKEYGGKVK
201: HWITFNEPWV FAHAGYDVGK KAPGRCSPYA KDETVKGDCL GGRSGYEAYL VSHNLLNAHA EAVEAFRQCE KCKGGKIGIA HSPAWFEPHD FKDEQSGATI
301: DRALDFIMGW HLDTTMFGDY PQTMKDIVGH RLPKFTTEQI AKLKNSADFV GINYYTSTFS KHLEKPNHAE PKFKQDSLVE WKNKNVNNIT IGSKPETGPL
401: PVYSTGFRKV LKYVKDKYAN PEIIIMENGY GENLKENDSV ENGTADYNRE SYLKKHLWSM HKAICEDKVN VTGYFVWSLM DNFEWQDGFK NRFGLYYIDY
501: KNNLTRHEKV SGKYYREFLS EGVRPSAIKK DEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)