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AT5G26600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 5894 Blast hits to 5894 proteins in 1748 species: Archae - 147; Bacteria - 3937; Metazoa - 27; Fungi - 186; Plants - 126; Viruses - 1; Other Eukaryotes - 1470 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-579-MONOMERBioCyc:ARA:GQT-580-MONOMEREC:4.4.1.-eggNOG:COG0520
eggNOG:ENOG410INGQEMBL:AF058914EMBL:AK229365EMBL:CP002688
EnsemblPlants:AT5G26600EnsemblPlants:AT5G26600.1EnsemblPlants:AT5G26600.2entrez:832730
Gene3D:3.40.640.10GeneID:832730Genevisible:Q3E6S9GO:GO:0009507
GO:GO:0016829Gramene:AT5G26600.1Gramene:AT5G26600.2hmmpanther:PTHR11601
hmmpanther:PTHR11601:SF47HOGENOM:HOG000029536InterPro:IPR000192InterPro:IPR015421
InterPro:IPR015424KEGG:ath:AT5G26600OMA:TGNCHKWPaxDb:Q3E6S9
Pfam:PF00266Pfam:Q3E6S9PhylomeDB:Q3E6S9PRIDE:Q3E6S9
PRO:PR:Q3E6S9ProteinModelPortal:Q3E6S9Proteomes:UP000006548RefSeq:NP_850886.1
RefSeq:NP_974838.1SMR:Q3E6S9STRING:3702.AT5G26600.1SUPFAM:SSF53383
TAIR:AT5G26600UniGene:At.23934UniProt:Q3E6S9
Coordinates (TAIR10) chr5:+:9377455..9378882
Molecular Weight (calculated) 52910.90 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.22
Length 475 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSLSPPEE ASYHHRHTKR YTSSASSASS TTNGTVESSV SDFVKRPKIS HPNYISSSEI ESEFSHHDPD FARINNGSFG CCPSSILALQ RDWQLRFLRQ
101: PDRFYFDELK PKISDSRSVI KRLINAEHDD EVSIVDNATT AAAIVLQQTA WAFREGRFDK GDAVVMLHYA YGSVKKSVEA YVTRSGGHVT EVQLPFPVIS
201: ADEIIDRFRI GLESGKANGR RVRLALIDHV TSMPSVVIPI KELVKICRRE GVDQVFVDAA HGIGCVDVDM KEIGADFYTS NLHKWFFAPP SVAFLYCRKS
301: SNGGVADLHH PVVSNEYGNG LAVESSWVGT RDYSAQLVVP SILEFVNRFE GGIDGIKKRN HESVVEMGQM LVKSWGTQLG CPPEMCASMI MVGLPVCLGV
401: SSESDVLKLR TFLREKFRIE IPIYFRPPGD GEIDPITGYV RISFQVYNKP EDYHRLRDAI NGLVRDGFKC TSLSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)