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AT5G21930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-type ATPase of Arabidopsis 2
Curator
Summary (TAIR10)
P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport
Computational
Description (TAIR10)
P-type ATPase of Arabidopsis 2 (PAA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: P-type ATP-ase 1 (TAIR:AT4G33520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G21930-MONOMERBioCyc:ARA:GQT-886-MONOMERBioCyc:MetaCyc:MONOMER-14496BRENDA:3.6.3.4
EC:3.6.3.4eggNOG:COG2217eggNOG:KOG0207EMBL:AC140977
EMBL:AK316941EMBL:AL589883EMBL:AY297817EMBL:CP002688
EnsemblPlants:AT5G21930EnsemblPlants:AT5G21930.1EnsemblPlants:AT5G21930.2entrez:832253
ExpressionAtlas:B9DFX7Gene3D:2.70.150.10Gene3D:3.40.1110.10Gene3D:3.40.50.1000
GeneID:832253GO:GO:0004008GO:GO:0005375GO:GO:0005524
GO:GO:0006825GO:GO:0009535GO:GO:0016021GO:GO:0035434
GO:GO:0046872hmmpanther:PTHR24093hmmpanther:PTHR24093:SF246HOGENOM:HOG000250397
InParanoid:B9DFX7InterPro:IPR001757InterPro:IPR006121InterPro:IPR008250
InterPro:IPR018303InterPro:IPR023214InterPro:IPR023299InterPro:IPR027256
iPTMnet:B9DFX7KEGG:ath:AT5G21930KO:K01533OMA:LCSDAIC
PaxDb:B9DFX7Pfam:B9DFX7Pfam:PF00122Pfam:PF00403
Pfam:PF00702Pfscan:PS50846PhylomeDB:B9DFX7PRIDE:B9DFX7
PRO:PR:B9DFX7PROSITE:PS00154PROSITE:PS50846ProteinModelPortal:B9DFX7
Proteomes:UP000006548RefSeq:NP_001031920.1RefSeq:NP_680181.2scanprosite:PS00154
SMR:B9DFX7STRING:3702.AT5G21930.1SUPFAM:0049471SUPFAM:0049473
SUPFAM:SSF55008SUPFAM:SSF56784SUPFAM:SSF81660TAIR:AT5G21930
tair10-symbols:ATHMA8tair10-symbols:HMA8tair10-symbols:PAA2TCDB:3.A.3.5.12
TIGRfam:TIGR01494TIGRfam:TIGR01525TIGRFAMs:TIGR01494TIGRFAMs:TIGR01525
TMHMM:TMhelixUniGene:At.44341UniProt:B9DFX7
Coordinates (TAIR10) chr5:+:7243129..7248721
Molecular Weight (calculated) 94265.70 Da
IEP (calculated) 6.30
GRAVY (calculated) 0.16
Length 883 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)