AT1G61900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast hits to 65 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22882508..22884722 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47031.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.66 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTRRAEFEMG LFVILQSMFL ISLCSSQKPE EFLPEISPDT SPQPFLPFIA PSPMVPYINS TMPKLSGLCS LNFSASESLI QTTSHNCWTV FAPLLANVMC 101: CPQLDATLTI ILGKASKETG LLALNRTQSK HCLSDLEQIL VGKGASGQLN KICSIHSSNL TSSSCPVINV DEFESTVDTA KLLLACEKID PVKECCEEAC 201: QNAILDAATN ISLKASETLT DNSDRINDCK NVVNRWLATK LDPSRVKETL RGLANCKINR VCPLVFPHMK HIGGNCSNEL SNQTGCCRAM ESYVSHLQKQ 301: TLITNLQALD CATSLGTKLQ KLNITKNIFS VCHISLKDFS LQVGNQESGC LLPSLPSDAI FDKDTGISFT CDLNDNIPAP WPSSSLSSAS TCKKPVRIPA 401: LPAAASSQPR LHDEGVTRLV IFVLSMLLVM LLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)