AT5G21222.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), CBL-interacting protein kinase (InterPro:IPR020660), Pentatricopeptide repeat (InterPro:IPR002885), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G25630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7209422..7213700 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93148.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 831 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSEPKVRRWV GKYEVGRLIG ECNFGKLRSA VDTETGDPVA LMILDKDKVL KHKMAEQIKR EISIMKLINH PNVVQLYEVL ASKAKIYIVL EFISGGKLFD 101: KIKNDGRMNE DEAQRYFQQL INAVDYCHSR GVYHRDLKPE NLLLDAQENL KVAEFGLIAL SQQAGGDGLR HTACGNPDYA APEVLNDQGY DGAKADLWSC 201: GVILFVLLAG YLPFEDSSLT TLYKKISSAD FSCPPWLSSG VKNLIVRILD PNPMTRITIP EILEDVWFKK DYKPAVFEEK KEANLADVEA VFKDSEEGRV 301: QLRSFPCVIC SGGTTCGDVR SRTKLMNGLI ERGRPQEAHS IFNTLIEEGH KPSLITYTTL VTALTRQKHF HSLLSLISKV EKNGLKPDTI LFNAIINASS 401: ESGNLDQAMK IFEKMKESGC KPTASTFNTL IKGYGKIGKL EESSRLLDMM LRDEMLQPND RTCNILVQAW CNQRKIEEAW NIVYKMQSYG VKPDVVTFNT 501: LAKAYARIGS TCTAEDMIIP RMLHNKVKPN VRTCGTIVNG YCEEGKMEEA LRFFYRMKEL GVHPNLFVFN SLIKGFLNIN DMDGVGEVVD LMEEFGVKPD 601: VVTFSTLMNA WSSVGDMKRC EEIYTDMLEG GIDPDIHAFS ILAKGYARAG EPEKAEQILN QMRKFGVRPN VVIYTQIISG WCSAGEMKKA MQVYKKMCGI 701: VGLSPNLTTY ETLIWGFGEA KQPWKAEELL KDMEGKNVVP TRKTMQLIAD GWKSIGVSNS NDANTLGSSF STSSKLNIPN NIASSRSPLF LKGMPEKPKL 801: CIKSQFGLRQ TLLVVLCRDQ IGEAGRFCKF M |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)