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AT1G60550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : enoyl-CoA hydratase/isomerase D
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
enoyl-CoA hydratase/isomerase D (ECHID); FUNCTIONS IN: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity, catalytic activity; INVOLVED IN: vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Naphthoate synthase (InterPro:IPR010198), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase A (TAIR:AT4G16210.1); Has 35699 Blast hits to 35688 proteins in 2278 species: Archae - 489; Bacteria - 23573; Metazoa - 1539; Fungi - 813; Plants - 522; Viruses - 0; Other Eukaryotes - 8763 (source: NCBI BLink).
Protein Annotations
EC:4.1.3.36eggNOG:COG0447eggNOG:ENOG410IPEHEMBL:AC002292
EMBL:AK117477EMBL:BT033085EMBL:CP002684EnsemblPlants:AT1G60550
EnsemblPlants:AT1G60550.1entrez:842350Gene3D:1.10.12.10Gene3D:3.90.226.10
GeneID:842350Genevisible:Q8GYN9GO:GO:0005777GO:GO:0008935
GO:GO:0009234GO:GO:0016853GO:GO:0042372Gramene:AT1G60550.1
gramene_pathway:4.1.3.36gramene_pathway:PWY-5791gramene_plant_reactome:1119498gramene_plant_reactome:6875501
HAMAP:MF_01934hmmpanther:PTHR11941hmmpanther:PTHR11941:SF20HOGENOM:HOG000027942
InParanoid:Q8GYN9InterPro:IPR001753InterPro:IPR010198InterPro:IPR014748
InterPro:IPR018376InterPro:IPR029045KEGG:00130+4.1.3.36KEGG:ath:AT1G60550
KO:K01661OMA:SIKMLKFPaxDb:Q8GYN9Pfam:PF00378
Pfam:Q8GYN9PhylomeDB:Q8GYN9PIR:G96630PRIDE:Q8GYN9
PRO:PR:Q8GYN9PROSITE:PS00166ProteinModelPortal:Q8GYN9Proteomes:UP000006548
RefSeq:NP_176255.2scanprosite:PS00166SMR:Q8GYN9STRING:3702.AT1G60550.1
SUPFAM:SSF52096TAIR:AT1G60550tair10-symbols:DHNStair10-symbols:ECHID
TIGRfam:TIGR01929TIGRFAMs:TIGR01929UniGene:At.36633unipathway:UPA00079
unipathway:UPA01057UniProt:Q8GYN9
Coordinates (TAIR10) chr1:-:22305988..22308092
Molecular Weight (calculated) 37058.30 Da
IEP (calculated) 7.28
GRAVY (calculated) -0.30
Length 337 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)