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AT5G14100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : non-intrinsic ABC protein 14
Curator
Summary (TAIR10)
member of NAP subfamily
Computational
Description (TAIR10)
non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1122eggNOG:ENOG410INJ1EMBL:AB007650EMBL:AK118738
EMBL:AY085446EMBL:BT006054EMBL:CP002688EnsemblPlants:AT5G14100
EnsemblPlants:AT5G14100.1entrez:831259Gene3D:3.40.50.300GeneID:831259
Genevisible:Q8LEF6GO:GO:0005215GO:GO:0005524GO:GO:0009507
GO:GO:0009941GO:GO:0016020GO:GO:0016887Gramene:AT5G14100.1
hmmpanther:PTHR24220hmmpanther:PTHR24220:SF511InParanoid:Q8LEF6InterPro:IPR003439
InterPro:IPR003593InterPro:IPR027417KEGG:ath:AT5G14100OMA:EWVFEND
PaxDb:Q8LEF6Pfam:PF00005Pfam:Q8LEF6Pfscan:PS50893
PhylomeDB:Q8LEF6PRIDE:Q8LEF6PRO:PR:Q8LEF6PROSITE:PS50893
ProteinModelPortal:Q8LEF6Proteomes:UP000006548RefSeq:NP_196914.1SMART:SM00382
SMR:Q8LEF6STRING:3702.AT5G14100.1SUPFAM:SSF52540TAIR:AT5G14100
tair10-symbols:ATNAP14tair10-symbols:NAP14UniGene:At.31976UniProt:Q8LEF6
Coordinates (TAIR10) chr5:-:4549706..4551632
Molecular Weight (calculated) 30715.30 Da
IEP (calculated) 9.19
GRAVY (calculated) -0.12
Length 278 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)