AT5G11020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.824 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G25220.1); Has 126026 Blast hits to 124569 proteins in 4706 species: Archae - 109; Bacteria - 14709; Metazoa - 46245; Fungi - 10730; Plants - 34371; Viruses - 558; Other Eukaryotes - 19304 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:3486439..3488983 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47812.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.70 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKQIVITALV LLQAYVLHQS TCVMSLTTQE SPSPQPSAFT PALSPDYQQR EKELHKQESN NMRLVISLAA TFSLVGIILL CSLLYWFCHR RRNLKSSGCG 101: CSGITFLNRF SRSKTLDKRT TKQGTVSLID YNILEEGTSG FKESNILGQG GFGCVYSATL ENNISAAVKK LDCANEDAAK EFKSEVEILS KLQHPNIISL 201: LGYSTNDTAR FIVYELMPNV SLESHLHGSS QGSAITWPMR MKIALDVTRG LEYLHEHCHP AIIHRDLKSS NILLDSNFNA KISDFGLAVV DGPKNKNHKL 301: SGTVGYVAPE YLLNGQLTEK SDVYAFGVVL LELLLGKKPV EKLAPGECQS IITWAMPYLT DRTKLPSVID PAIKDTMDLK HLYQVAAVAI LCVQPEPSYR 401: PLITDVLHSL IPLVPMELGG TLKTIKCASM DHC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)