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AT5G08460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.674
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G71250.1); Has 3252 Blast hits to 3210 proteins in 140 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 11; Plants - 3054; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G08460-MONOMEREC:3.1.1.-eggNOG:COG3240eggNOG:ENOG410IEA3
EMBL:AB006697EMBL:CP002688EnsemblPlants:AT5G08460EnsemblPlants:AT5G08460.1
entrez:830745Gene3D:3.40.50.1110GeneID:830745Genevisible:Q9FNP2
GO:GO:0005576GO:GO:0016042GO:GO:0016788Gramene:AT5G08460.1
hmmpanther:PTHR22835hmmpanther:PTHR22835:SF192HOGENOM:HOG000237649InParanoid:Q9FNP2
InterPro:IPR001087InterPro:IPR013830iPTMnet:Q9FNP2KEGG:ath:AT5G08460
OMA:PFNYGFEPaxDb:Q9FNP2Pfam:PF00657Pfam:Q9FNP2
PhylomeDB:Q9FNP2PRIDE:Q9FNP2PRO:PR:Q9FNP2ProteinModelPortal:Q9FNP2
Proteomes:UP000006548RefSeq:NP_196463.1TAIR:AT5G08460TMHMM:TMhelix
UniGene:At.32576UniProt:Q9FNP2
Coordinates (TAIR10) chr5:+:2733220..2735351
Molecular Weight (calculated) 42419.80 Da
IEP (calculated) 4.87
GRAVY (calculated) 0.06
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MHDSEIFKFK DMMMMSCTVQ TLVLVPWFLV VFVLAGGEDS SETTAMFPAM FVFGDSLVDN GNNNHLNSLA RSNYLPYGID FAGNQPTGRF SNGKTIVDFI
101: GELLGLPEIP AFMDTVDGGV DILHGVNYAS AAGGILEETG RHLGERFSMG RQVENFEKTL MEISRSMRKE SVKEYMAKSL VVVSLGNNDY INNYLKPRLF
201: LSSSIYDPTS FADLLLSNFT THLLELYGKG FRKFVIAGVG PLGCIPDQLA AQAALPGECV EAVNEMAELF NNRLVSLVDR LNSDNKTASE AIFVYGNTYG
301: AAVDILTNPF NYGFEVTDRG CCGVGRNRGE ITCLPLAVPC AFRDRHVFWD AFHPTQAFNL IIALRAFNGS KSDCYPINLS QLSRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)