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AT5G07080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.752
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G47170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G07080-MONOMEReggNOG:ENOG410JXR1eggNOG:ENOG41103RPEMBL:AB010697
EMBL:AL163652EMBL:AY056183EMBL:AY117172EMBL:CP002688
EnsemblPlants:AT5G07080EnsemblPlants:AT5G07080.1entrez:830599Gene3D:3.30.559.10
GeneID:830599GO:GO:0016747Gramene:AT5G07080.1hmmpanther:PTHR31147
hmmpanther:PTHR31147:SF9InterPro:IPR003480InterPro:IPR023213KEGG:ath:AT5G07080
ncoils:CoilOMA:ICIFLPRPfam:PF02458PhylomeDB:Q9LYQ7
PIR:T48479Proteomes:UP000006548RefSeq:NP_196325.1SMR:Q9LYQ7
STRING:3702.AT5G07080.1TAIR:AT5G07080UniGene:At.5039UniProt:Q9LYQ7
Coordinates (TAIR10) chr5:+:2200353..2201975
Molecular Weight (calculated) 48953.00 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.05
Length 450 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSQGMSSPS PLVVKKSQVV IVKPSKATPD VSLSLSTLDN DPYLETLAKT IYVYAPPSPN DHVHDPASLF QQALSDALVY YYPLAGKLHR GSHDHRLELR
101: CSPAEGVPFV RATADCTLSS LNYLKDMDTD LYQLVPCDVA APSGDYNPLA LQITLFACGG LTLATALSHS LCDGFGASQF FKTLTELAAG KTQPSIIPVW
201: DRHRLTSNNF SLNDQVEEGQ APKLVDFGEA CSSAATSPYT PSNDMVCEIL NVTSEDITQL KEKVAGVVTT LEILAAHVWR ARCRALKLSP DGTSLFGMAV
301: GIRRIVEPPL PEGYYGNAFV KANVAMKAGE LSNSPLSHVV QLIKEAKKAA QEKRYVLEQL RETEKTLKMN VACEGGKGAF MLLTDWRQLG LLDEIDFGYG
401: GSVNIIPLVP KYLPDICIFL PRKQGGVRVL VTLPKSVMVN FKEHINPLNT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)