AT3G21550.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.997 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : DUF679 domain membrane protein 2 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
DUF679 domain membrane protein 2 (DMP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: DUF679 domain membrane protein 1 (TAIR:AT3G21520.1); Has 265 Blast hits to 257 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 265; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:7591708..7592262 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20167.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.37 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.38 | ||||||||||||||||||||||||||||||||
| Length | 184 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS 101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)