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AT3G62160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G28680.1); Has 2278 Blast hits to 2266 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 2263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G62160-MONOMEReggNOG:ENOG410IKREeggNOG:ENOG410YE2YEMBL:AL138651
EMBL:BT020224EMBL:BT020438EMBL:CP002686EnsemblPlants:AT3G62160
EnsemblPlants:AT3G62160.1entrez:825389Gene3D:3.30.559.10GeneID:825389
GO:GO:0016747Gramene:AT3G62160.1hmmpanther:PTHR31147hmmpanther:PTHR31147:SF1
HOGENOM:HOG000237409InterPro:IPR003480InterPro:IPR023213KEGG:ath:AT3G62160
OMA:RTLHVFRPfam:PF02458PhylomeDB:Q9M1Q8PIR:T48008
Proteomes:UP000006548RefSeq:NP_191775.1SMR:Q9M1Q8STRING:3702.AT3G62160.1
TAIR:AT3G62160UniGene:At.34171UniProt:Q9M1Q8
Coordinates (TAIR10) chr3:-:23014333..23015808
Molecular Weight (calculated) 47556.30 Da
IEP (calculated) 5.16
GRAVY (calculated) 0.03
Length 428 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFSLTRVNR VLIQACETTP SVVLDLSLID NIPVLRCFAR TIHVFTHGPD AARAIQEALA KALVSYYPLS GRLKELNQGK LQIDCTGKTG IWFVDAVTDV
101: KLESVGYFDN LMEIPYDDLL PDQIPKDDDA EPLVQMQVTQ FSCGGFVMGL RFCHAICDGL GAAQFLTAVG EIACGQTNLG VSPVWHRDFI PQQHRANDVI
201: SPAIPPPFPP AFPEYKLEHL SFDIPSDLIE RFKREFRAST GEICSAFEVI AACFWKLRTE AINLREDTEV KLVFFANCRH LVNPPLPIGF YGNCFFPVKI
301: SAESHEISKE KSVFDVVKLI KQAKTKLPEE FEKFVSGDGD DPFAPAVGYN TLFLSEWGKL GFNQVDYGWG PPLHVAPIQG LSIVPAGIVG SVPLPKKGVR
401: LMTWCVEETH CQLFDDLMTN KLTSNKTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)