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AT5G05740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ethylene-dependent gravitropism-deficient and yellow-green-like 2
Curator
Summary (TAIR10)
S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442–454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171–179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.
Computational
Description (TAIR10)
ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:3.4.24.-eggNOG:COG0750eggNOG:ENOG410IIWUEMBL:AB005237
EMBL:CP002688EnsemblPlants:AT5G05740EnsemblPlants:AT5G05740.1entrez:830458
ExpressionAtlas:Q9FFK3GeneID:830458Genevisible:Q9FFK3GO:GO:0004222
GO:GO:0009507GO:GO:0009535GO:GO:0016021GO:GO:0031969
hmmpanther:PTHR31412hmmpanther:PTHR31412:SF5HOGENOM:HOG000006203InParanoid:Q9FFK3
MEROPS:M50.A01OMA:PYPFPFDPaxDb:Q9FFK3Pfam:PF02163
Pfam:Q9FFK3PhylomeDB:Q9FFK3PRIDE:Q9FFK3PRO:PR:Q9FFK3
PROSITE:PS00142ProteinModelPortal:Q9FFK3Proteomes:UP000006548RefSeq:NP_196193.1
SMR:Q9FFK3STRING:3702.AT5G05740.1TAIR:AT5G05740tair10-symbols:ATEGY2
tair10-symbols:EGY2TMHMM:TMhelixUniGene:At.32959UniProt:Q9FFK3
Coordinates (TAIR10) chr5:-:1724023..1726859
Molecular Weight (calculated) 60067.60 Da
IEP (calculated) 4.72
GRAVY (calculated) 0.22
Length 556 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLAVASFRG NFGVLSQCSS CCSLQFQPFV AATSSLNFGQ TGTSRRKKDL KLERVFRKRE TLVRVTETQT EPEGNDDEDN KEGKESSADD PPTKIPTELN
101: SQSTVVNEAP GNEEENKAQF SSQDGDKLEV SSGSPLPGVN VSIIIHVIYK DDSIMFSGCL SFIKSCCEQP LQLDDSMRLP KETIDILRGQ VFGFDTFFVT
201: SQEPYEGGVL FKGNLRGKPA TSYEKIKTRM ENNFGDQYKL FLLTNPEDDK PVAVVVPRRS LEPETTAVPE WFAAGSFGLV ALFTLFLRNV PALQSDLLSA
301: FDNLELLKDG LPGALVTALV LGVHELGHIL VANSLGIKLG VPFFVPSWQI GSFGAITRIK NIVAKREDLL KVAAAGPLAG FSLGLILFLI GLFVPPSDGI
401: GVVVDASVFH ESFLAGGIAK LLLGDALKEG TSISLNPLVI WAWAGLLING INSIPAGELD GGKIAFSIWG RKTATRLTGA SIALLGLSAL FSDVAFYWVV
501: LIFFLQRGPI APLAEEITVP DDKYVSLGIL VLFLSLLVCL PYPFAFTGNE AMMIGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)