AT1G14270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CAAX amino terminal protease family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CAAX amino terminal protease family protein; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT5G60750.1); Has 3763 Blast hits to 3760 proteins in 994 species: Archae - 88; Bacteria - 3260; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4875099..4877195 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38554.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.11 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.46 | ||||||||||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCGSSLRTTE NFKMVSQIIS CLSQSSSLLC LSDSRRLILP KTCTYGGLSR FSPGFASRRL FTVNRKKWRS ACIFNSGKEP GGEGKLQGGS SEWPILQRWE 101: VPWGWQTVSL TSFACALSFV LTGLTEMAVI PFLGIDVEKL TLDDKAEILF LDQGLTTAVV LAVIFTVAKT FDPLPEDILR YDLRQPVNLQ KGWLVWGGIG 201: LVGAVGAIAL TGVVLSVFRT EAPEREVDSL MKLLPLIGSS NISTLSLVGI TGILAPLLEE TVFRGFFMVS LTKWVPTPIA IIISSAAFAL AHFTPGEFPQ 301: LFILGSVLGL SYAQTRNLIT PMVIHGFWNS GVILLLTFLQ IQGYDIKELL QAN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)