AT5G03690.2
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Aldolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT2G36460.1); Has 5010 Blast hits to 5004 proteins in 974 species: Archae - 0; Bacteria - 706; Metazoa - 1412; Fungi - 8; Plants - 478; Viruses - 0; Other Eukaryotes - 2406 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:963389..964982 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38632.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.88 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 359 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSCFKSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRF VSINVENVES NRRALRELLF TTPGALQYIS GIILFEETLY QKTASGKLFV DVMKEAGVLP 101: GIKVDKGTVE LAGTNGETTT TGLDGLGDRC KKYYEAGARF AKWRAVLKIG NNEPSELAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIEKCAYV 201: TERVLAACYK ALSDHHVILE GTLLKPNMVT PGSDSGSKVK PEVIAKHTVR ALQRTVPAAV PAVVFLSGGQ SEEEATVNLN AINQLKGKKP WSLTFSYGRA 301: LQQSTLKAWG GKEENVDKAQ KAFLARAKAN SEATLGGYKG DAQLGEGASE SLHVKDYKY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)