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AT5G03080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.592
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidic acid phosphatase (PAP2) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 881 Blast hits to 875 proteins in 378 species: Archae - 15; Bacteria - 412; Metazoa - 127; Fungi - 150; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Protein Annotations
BRENDA:3.1.3.4EC:3.1.3.-eggNOG:COG0671eggNOG:KOG3146
EMBL:AK228952EMBL:AL163002EMBL:BT010758EMBL:BT012429
EMBL:CP002688EnsemblPlants:AT5G03080EnsemblPlants:AT5G03080.1entrez:831801
Gene3D:1.20.144.10GeneID:831801Genevisible:Q6NLA5GO:GO:0006487
GO:GO:0006651GO:GO:0008195GO:GO:0009507GO:GO:0009706
GO:GO:0016311GO:GO:0030176GO:GO:0047874GO:GO:0048868
Gramene:AT5G03080.1hmmpanther:PTHR11247HOGENOM:HOG000201506InParanoid:Q6NLA5
InterPro:IPR000326iPTMnet:Q6NLA5KEGG:ath:AT5G03080KO:K07252
OMA:LWFEYTNPaxDb:Q6NLA5Pfam:PF01569Pfam:Q6NLA5
PhylomeDB:Q6NLA5PIR:T48329PRIDE:Q6NLA5PRO:PR:Q6NLA5
ProteinModelPortal:Q6NLA5Proteomes:UP000006548Reactome:R-ATH-446199RefSeq:NP_195928.1
SMART:SM00014STRING:3702.AT5G03080.1SUPFAM:SSF48317TAIR:AT5G03080
TMHMM:TMhelixUniGene:At.4996UniProt:Q6NLA5
Coordinates (TAIR10) chr5:+:721976..722656
Molecular Weight (calculated) 25755.30 Da
IEP (calculated) 8.10
GRAVY (calculated) 0.32
Length 226 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLIPQQLKA VTLTHVRYRP GDQLGHFLAW ISLVPVFISL GGFVSHFLFR RELQGIFFGI GLVISQFINE FIKTSVEQAR PETCTLLEAC DSHGWPSSHS
101: QFMFFFATYF SLMGCKGIGF WFGLRSRWIM NLLHWSLAVV TMYSRVYLGY HTVAQVFAGA ALGGIVGASW FWVVNSVLYP FFPVIEESVL GRWLYVKDTS
201: HIPDVLKFEY DNARAARKDM DSAKSD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)