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AT5G01390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.967
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AK119010EMBL:AL161746
EMBL:AY084667EMBL:BT005582EMBL:CP002688EnsemblPlants:AT5G01390
EnsemblPlants:AT5G01390.1entrez:831415ExpressionAtlas:Q9M034Gene3D:1.10.287.110
GeneID:831415GO:GO:0006457Gramene:AT5G01390.1hmmpanther:PTHR24078
hmmpanther:PTHR24078:SF298HOGENOM:HOG000226718InterPro:IPR001623InterPro:IPR002939
InterPro:IPR008971InterPro:IPR018253OMA:DIFASFRPfam:PF00226
Pfam:PF01556Pfscan:PS50076PhylomeDB:Q9M034PIR:T48161
PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076Proteomes:UP000006548
Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571Reactome:R-ATH-5687128
RefSeq:NP_195759.1scanprosite:PS00636SMART:SM00271SMR:Q9M034
STRING:3702.AT5G01390.1SUPFAM:SSF46565SUPFAM:SSF49493TAIR:AT5G01390
UniGene:At.33559UniProt:Q9M034
Coordinates (TAIR10) chr5:-:160500..162199
Molecular Weight (calculated) 36972.90 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.60
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVDFYKVLE VDRSANDDEL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYDVLSDP QKRAIYEQYG EEGLNQAPPP GAGGGYPGGS DAGASFRFNP
101: RSADDIFSEF FGFTRPSFGT GSDSRAGPSG FRYGDDIFAS FRAATTGGEA SIPSRKSAPI ERQLPCSLED LYKGVSKKMK ISRDVLDSSG RPTPVEEILT
201: IEIKPGWKKG TKITFLEKGN EHRGVIPSDL VFIVDEKPHP VFKRDGNDLV VMQKISLVDA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP
301: KDPSRKGNLR IRFIIKFPSK LTTEQKSGIK RMLSP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)