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AT1G55805.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BolA-like family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: chloroplast sulfur E (TAIR:AT4G26500.1); Has 3687 Blast hits to 3687 proteins in 1115 species: Archae - 26; Bacteria - 2113; Metazoa - 172; Fungi - 142; Plants - 137; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0271eggNOG:KOG2313EMBL:AC002304EMBL:AF389294
EMBL:AK175386EMBL:AK175557EMBL:AK175698EMBL:AK220773
EMBL:AY143802EMBL:CP002684EnsemblPlants:AT1G55805EnsemblPlants:AT1G55805.1
entrez:842030GeneID:842030Genevisible:Q682I1GO:GO:0009507
GO:GO:0046872GO:GO:0051537Gramene:AT1G55805.1hmmpanther:PTHR12735
hmmpanther:PTHR12735:SF21InterPro:IPR002634KEGG:ath:AT1G55805KO:K05527
OMA:ANKIESHPaxDb:Q682I1PDB:4PUGPDBsum:4PUG
Pfam:PF01722Pfam:Q682I1PhylomeDB:Q682I1PRIDE:Q682I1
PRO:PR:Q682I1ProteinModelPortal:Q682I1Proteomes:UP000006548RefSeq:NP_564702.2
SMR:Q682I1STRING:3702.AT1G55805.1SUPFAM:SSF82657TAIR:AT1G55805
UniGene:At.23659UniProt:Q682I1
Coordinates (TAIR10) chr1:-:20858956..20859438
Molecular Weight (calculated) 17673.00 Da
IEP (calculated) 9.88
GRAVY (calculated) -0.48
Length 160 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSSSIRLIV SGFHRTQPLK SPVNSPSVFI SVPKFFNSES KSTGTGSRSV AMSSVEKTGS DSGAIENRAS RMREKLQKEL EPVELVIEDV SYQHAGHAGM
101: KGRTDDETHF NVKIVSKGFE GMNLVKRHRL VYHLLREELD TGLHALSIVS KTPSESPSKD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)