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AT4G38370.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHV4eggNOG:ENOG4111K7XEMBL:AK226503EMBL:CP002687
EnsemblPlants:AT4G38370EnsemblPlants:AT4G38370.1entrez:829994Gene3D:3.40.50.1240
GeneID:829994GO:GO:0005829Gramene:AT4G38370.1hmmpanther:PTHR23029
hmmpanther:PTHR23029:SF36HOGENOM:HOG000005860InterPro:IPR013078InterPro:IPR029033
KEGG:ath:AT4G38370OMA:YPEIWALPfam:PF00300PhylomeDB:Q0WW53
Proteomes:UP000006548RefSeq:NP_568040.1SMART:SM00855SUPFAM:SSF53254
TAIR:AT4G38370UniGene:At.2762UniGene:At.71220UniProt:Q0WW53
Coordinates (TAIR10) chr4:-:17970112..17971222
Molecular Weight (calculated) 25258.20 Da
IEP (calculated) 6.25
GRAVY (calculated) -0.39
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSSSVGNTN RYWVLRHGKS IPNERGLVVS SMENGVLPEY QLAPDGVAQA RLAGESFLQQ LKESNIELDK VRICYSPFSR TTHTARVVAK VLNLPFDAPQ
101: CKMMEDLRER YFGPTFELKS HDKYPEIWAL DEKDPFMGPE GGESADDVVS RLATAMKSME AEYQRCAILV VSHGDPLQML QNVFHSAKQQ EGDGLAEKFQ
201: LSRVASVLSQ HRKFALLTGE LRPLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)