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AT5G08100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 3243 Blast hits to 3196 proteins in 873 species: Archae - 113; Bacteria - 1502; Metazoa - 516; Fungi - 215; Plants - 193; Viruses - 0; Other Eukaryotes - 704 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G08100-MONOMERBioCyc:ARA:GQT-2513-MONOMEREC:3.4.19.5eggNOG:COG1446
eggNOG:KOG1592EMBL:AL357612EMBL:AY039555EMBL:AY093755
EMBL:CP002688EMBL:Z34884EnsemblPlants:AT5G08100EnsemblPlants:AT5G08100.1
entrez:830704ExpressionAtlas:P50287GeneID:830704Genevisible:P50287
GO:GO:0004067GO:GO:0005829GO:GO:0008798gramene_pathway:3.5.1.1
gramene_pathway:ASPARAGINE-DEG1-PWYgramene_plant_reactome:1119393gramene_plant_reactome:6876473hmmpanther:PTHR10188
hmmpanther:PTHR10188:SF24HOGENOM:HOG000174613InParanoid:P50287InterPro:IPR000246
InterPro:IPR029055iPTMnet:P50287KEGG:ath:AT5G08100KO:K13051
MEROPS:T02.A01OMA:STHEMDAPANTHER:PTHR10188PaxDb:P50287
Pfam:P50287Pfam:PF01112PhylomeDB:P50287PIR:S53127
PIR:T50495PRIDE:P50287PRO:PR:P50287ProteinModelPortal:P50287
Proteomes:UP000006548Reactome:R-ATH-71182RefSeq:NP_196427.1SABIO-RK:P50287
SMR:P50287STRING:3702.AT5G08100.1SUPFAM:SSF56235TAIR:AT5G08100
UniGene:At.5449UniGene:At.54776UniProt:P50287
Coordinates (TAIR10) chr5:-:2593242..2594586
Molecular Weight (calculated) 33029.40 Da
IEP (calculated) 5.18
GRAVY (calculated) 0.00
Length 315 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGWAIALHG GAGDIPIDLP DERRIPRESA LRHCLDLGIS ALKSGKPPLD VAELVVRELE NHPDFNAGKG SVLTAQGTVE MEASIMDGKT KRCGAVSGLT
101: TVVNPISLAR LVMEKTPHIY LAFDAAEAFA RAHGVETVDS SHFITPENIA RLKQAKEFNR VQLDYTVPSP KVPDNCGDSQ IGTVGCVAVD SAGNLASATS
201: TGGYVNKMVG RIGDTPVIGA GTYANHLCAI SATGKGEDII RGTVARDVAA LMEYKGLSLT EAAAYVVDQS VPRGSCGLVA VSANGEVTMP FNTTGMFRAC
301: ASEDGYSEIA IWPNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)