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AT4G36750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22215637 (2012): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15060130 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Quinone reductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3509 Blast hits to 3505 proteins in 1117 species: Archae - 64; Bacteria - 2674; Metazoa - 2; Fungi - 274; Plants - 203; Viruses - 1; Other Eukaryotes - 291 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G36750-MONOMERBioGrid:15109EC:1.6.5.2eggNOG:COG0655
eggNOG:KOG3135EMBL:AL161590EMBL:AY087410EMBL:CP002687
EMBL:Z99708EnsemblPlants:AT4G36750EnsemblPlants:AT4G36750.1entrez:829828
Gene3D:3.40.50.360GeneID:829828Genevisible:O23207GO:GO:0003955
GO:GO:0005886GO:GO:0010181GO:GO:0045892Gramene:AT4G36750.1
HAMAP:MF_01017hmmpanther:PTHR30546hmmpanther:PTHR30546:SF3HOGENOM:HOG000030539
InParanoid:O23207InterPro:IPR005025InterPro:IPR008254InterPro:IPR010089
InterPro:IPR029039iPTMnet:O23207KEGG:00130+1.6.5.2KEGG:ath:AT4G36750
KO:K03809OMA:MMMPLLHPaxDb:O23207Pfam:O23207
Pfam:PF03358Pfscan:PS50902PhylomeDB:O23207PIR:A85434
PRIDE:O23207PRO:PR:O23207PROSITE:PS50902ProteinModelPortal:O23207
Proteomes:UP000006548RefSeq:NP_195393.1SMR:O23207STRING:3702.AT4G36750.1
SUPFAM:SSF52218SwissPalm:O23207TAIR:AT4G36750TIGRfam:TIGR01755
TIGRFAMs:TIGR01755UniGene:At.4629UniProt:O23207
Coordinates (TAIR10) chr4:+:17324642..17326215
Molecular Weight (calculated) 28756.10 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.21
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKGGGCVPS KKKKPATTGD GPGIDDDNDA TNAPIQIDDD QTTIDGDRTT ATNTGGTTTP AITTTAAKIS SPLKIFVVFY SMYGHVESLA KRMKKGVDSV
101: EGVEATLYRV PETLSQEVVE QMKAPVKDLE IPEITAAELT AADGFLFGFP TRYGCMAAQM KAFFDSTGSL WKEQSLAGKP AGFFVSTGTQ GGGQETTAWT
201: AITQLVHHGM LFVPIGYTFG AGMFKMDSIR GGSPYGAGVF AGDGSREATE TELALAEHQG NYMAAIVKRL AQP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)