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AT4G35720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Arabidopsis protein of unknown function (DUF241)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Arabidopsis protein of unknown function (DUF241); EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ0YeggNOG:ENOG41113EXEMBL:AL031135EMBL:AL161587
EMBL:CP002687EnsemblPlants:AT4G35720EnsemblPlants:AT4G35720.1entrez:829724
GeneID:829724Gramene:AT4G35720.1hmmpanther:PTHR33070hmmpanther:PTHR33070:SF18
HOGENOM:HOG000242965InterPro:IPR004320KEGG:ath:AT4G35720OMA:LTELYRC
Pfam:PF03087PhylomeDB:O81803PIR:T04677Proteomes:UP000006548
RefSeq:NP_195297.1STRING:3702.AT4G35720.1TAIR:AT4G35720UniGene:At.31391
UniProt:O81803
Coordinates (TAIR10) chr4:+:16927972..16928949
Molecular Weight (calculated) 36574.30 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.29
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MYMASLSPRL HKAYKARCVS LPVRSHPSVR RIQEVVSKVR ALGSSSLDSR TIVRDSLSGL TELYRCLSED LFKSSSETQQ ALLNGDGLME ELLEVSLKYL
101: EVCGGAKDAA SRIKKIVVEL QSALRRSKKG GEFSLESDVD AYVASRKEIK QEIKKYMVMS KETDASLESV WCDGDDQEMS ALVRVMQETS VMTCFVLRSV
201: FSFLSSPKGL KTKNHHHHKG WGIVMKLVKK GIEHHHQEKR DYETGFSCLV LEAMESELGK LVVMMTREDQ EEEKKISEEV SERVQCALVR SEGVEAAMEE
301: LEEGLEGLFK VMIQARVSLL NILST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)