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AT4G35010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-galactosidase 11
Curator
Summary (TAIR10)
putative beta-galactosidase (BGAL11 gene)
Computational
Description (TAIR10)
beta-galactosidase 11 (BGAL11); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 35 protein (TAIR:AT2G16730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G35010-MONOMERCAZy:GH35EC:3.2.1.23eggNOG:COG1874
eggNOG:KOG0496EMBL:AJ270307EMBL:AL022023EMBL:AL161586
EMBL:CP002687EnsemblPlants:AT4G35010EnsemblPlants:AT4G35010.1entrez:829653
Gene3D:2.60.120.260Gene3D:3.20.20.80GeneID:829653Genevisible:Q9SCV1
GO:GO:0004565GO:GO:0005618GO:GO:0005975GO:GO:0030246
GO:GO:0048046Gramene:AT4G35010.1hmmpanther:PTHR23421hmmpanther:PTHR23421:SF52
HOGENOM:HOG000239919InParanoid:Q9SCV1InterPro:IPR000922InterPro:IPR001944
InterPro:IPR008979InterPro:IPR013781InterPro:IPR017853InterPro:IPR019801
InterPro:IPR025300InterPro:IPR031330iPTMnet:Q9SCV1KEGG:00052+3.2.1.23
KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23
KEGG:ath:AT4G35010OMA:ICSYITEPANTHER:PTHR23421PaxDb:Q9SCV1
Pfam:PF01301Pfam:PF02140Pfam:PF13364Pfam:Q9SCV1
Pfscan:PS50228PhylomeDB:Q9SCV1PIR:T05771PRIDE:Q9SCV1
PRINTS:PR00742PRO:PR:Q9SCV1PROSITE:PS01182PROSITE:PS50228
ProteinModelPortal:Q9SCV1Proteomes:UP000006548RefSeq:NP_567973.1scanprosite:PS01182
SMR:Q9SCV1STRING:3702.AT4G35010.1SUPFAM:SSF49785SUPFAM:SSF51445
TAIR:AT4G35010tair10-symbols:BGAL11UniGene:At.706UniProt:Q9SCV1
Coordinates (TAIR10) chr4:-:16668075..16671974
Molecular Weight (calculated) 95574.70 Da
IEP (calculated) 9.90
GRAVY (calculated) -0.52
Length 845 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKHSLDRWL LTAVLVVLLS SSSSFAAKKD AKKKKKSNKE VTYDGTSLII DGKRELLYSG SIHYPRSTPE MWPSIIKRAK QGGLNTIQTY VFWNVHEPQQ
101: GKFNFSGRAD LVKFIKLIQK NGMYVTLRLG PFIQAEWTHG GLPYWLREVP GIFFRTDNKQ FKEHTERYVR MILDKMKEER LFASQGGPII LGQIENEYSA
201: VQRAYKQDGL NYIKWASNLV DSMKLGIPWV MCKQNDAPDP MINACNGRHC GDTFPGPNRE NKPSLWTENW TTQFRVFGDP PTQRSVEDIA YSVARFFSKN
301: GTHVNYYMYH GGTNFGRTSA HYVTTRYYDD APLDEYGLEK EPKYGHLKHL HNALNLCKKP LLWGQPKTEK PGKDTEIRYY EQPGTKTCAA FLANNNTEAA
401: ETIKFKGREY VIAPRSISIL PDCKTVVYNT AQIVSQHTSR NFMKSKKANK KFDFKVFTET LPSKLEGNSY IPVELYGLTK DKTDYGWYTT SFKVHKNHLP
501: TKKGVKTFVR IASLGHALHA WLNGEYLGSG HGSHEEKSFV FQKQVTLKAG ENHLVMLGVL TGFPDSGSYM EHRYTGPRGI SILGLTSGTL DLTESSKWGN
601: KIGMEGEKLG IHTEEGLKKV EWKKFTGKAP GLTWYQTYFD APESVSAATI RMHGMGKGLI WVNGEGVGRY WQSFLSPLGQ PTQIEYHIPR SFLKPKKNLL
701: VIFEEEPNVK PELMDFAIVN RDTVCSYVGE NYTPSVRHWT RKKDQVQAIT DNVSLTATLK CSGTKKIAAV EFASFGNPIG VCGNFTLGTC NAPVSKQVIE
801: KHCLGKAECV IPVNKSTFQQ DKKDSCKNVV KMLAVQVKCG RGKKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)