suba logo
AT4G34840.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.603
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphorylase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphorylase superfamily protein; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: methylthioadenosine nucleosidase 1 (TAIR:AT4G38800.1); Has 2832 Blast hits to 2832 proteins in 1251 species: Archae - 0; Bacteria - 2704; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G34840-MONOMERBRENDA:2.4.2.28BRENDA:3.2.2.9DNASU:829636
EC:3.2.2.9eggNOG:ENOG410IEX0eggNOG:ENOG4111IXCEMBL:AK229730
EMBL:AL079347EMBL:AL161586EMBL:BT010195EMBL:CP002687
EnsemblPlants:AT4G34840EnsemblPlants:AT4G34840.1entrez:829636EvolutionaryTrace:Q7XA67
Gene3D:3.40.50.1580GeneID:829636Genevisible:Q7XA67GO:GO:0000003
GO:GO:0001944GO:GO:0008782GO:GO:0008930GO:GO:0009116
GO:GO:0019509Gramene:AT4G34840.1gramene_pathway:3.2.2.16gramene_pathway:PWY-4361-ARA
gramene_plant_reactome:1119624gramene_plant_reactome:6876898hmmpanther:PTHR21234hmmpanther:PTHR21234:SF16
HOGENOM:HOG000241650InterPro:IPR000845InterPro:IPR018017KEGG:ath:AT4G34840
KO:K01244OMA:HDEESITPANTHER:PTHR21234PaxDb:Q7XA67
PDB:3BSFPDBsum:3BSFPfam:PF01048Pfam:Q7XA67
PhylomeDB:Q7XA67PIR:T10230PRIDE:Q7XA67PRO:PR:Q7XA67
ProteinModelPortal:Q7XA67Proteomes:UP000006548RefSeq:NP_195210.2SMR:Q7XA67
STRING:3702.AT4G34840.1SUPFAM:SSF53167TAIR:AT4G34840tair10-symbols:ATMTAN2
tair10-symbols:ATMTN2tair10-symbols:MTAN2tair10-symbols:MTN2UniGene:At.31466
UniPathway:UPA00904UniProt:Q7XA67
Coordinates (TAIR10) chr4:+:16606299..16607748
Molecular Weight (calculated) 27463.50 Da
IEP (calculated) 4.64
GRAVY (calculated) 0.18
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)