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AT4G33100.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.618
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111YV1eggNOG:KOG3481EMBL:AK175258EMBL:AK175878
EMBL:AL035525EMBL:AL161582EMBL:BT010619EMBL:CP002687
EnsemblPlants:AT4G33100EnsemblPlants:AT4G33100.1entrez:829447GeneID:829447
Genevisible:Q9SMZ9Gramene:AT4G33100.1hmmpanther:PTHR21329HOGENOM:HOG000230782
InParanoid:Q9SMZ9InterPro:IPR007918KEGG:ath:AT4G33100KO:K17968
OMA:AYHNCFNPaxDb:Q9SMZ9Pfam:PF05254Pfam:Q9SMZ9
PhylomeDB:Q9SMZ9PIR:T05190PRIDE:Q9SMZ9PRO:PR:Q9SMZ9
ProteinModelPortal:Q9SMZ9Proteomes:UP000006548RefSeq:NP_195036.1SMR:Q9SMZ9
STRING:3702.AT4G33100.1TAIR:AT4G33100UniGene:At.31609UniGene:At.31610
UniProt:Q9SMZ9
Coordinates (TAIR10) chr4:+:15971701..15972342
Molecular Weight (calculated) 10540.30 Da
IEP (calculated) 7.92
GRAVY (calculated) -0.99
Length 92 amino acids
Sequence (TAIR10)
(BLAST)
1: MGLLKKKDST SARSSTSPCA DLRNAYHNCF NKWYSEKFVK GQWDKEECVA EWKKYRDCLS ENLDGKLLTR ILEVDGELNP TKQATDSKES SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)