AT2G38680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 5'-nucleotidases;magnesium ion binding | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16174011..16175873 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35787.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.76 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||
| Length | 315 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPCELSANT VIAHPRALTD KMTLIRDAGP SKFQVIADFD ATLTRYRVNG LRGRQTSHGL LQQGDAYYDA KRQALYDHYH PLEISPVIPI DEKTKLMEEW 101: WGKTHELLIE GGLTYDAIKK SVANSSIAFR EGVSELFEFL EKKEIPVLIF SAGLADVIEE VLRQNLDRTF KNVKIVSNRM VFNDDGQLVS FKGKLIHVLN 201: KNEHALDMAA PLHDRLGVDI GEEDEENVNM KERRNVLLMG DHLGDLRMSD GLDYETRISI GFLNDNIEKS LESYRESFDL VYLNDAPMWG ALELVSRLFS 301: TEAINLTAFI DVKEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)