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AT4G34630.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.975
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JI7YeggNOG:ENOG4111E2FEMBL:AL023094EMBL:AL161585
EMBL:AY086057EMBL:AY099667EMBL:AY128852EMBL:CP002687
EnsemblPlants:AT4G34630EnsemblPlants:AT4G34630.1entrez:829615GeneID:829615
Gramene:AT4G34630.1HOGENOM:HOG000115014KEGG:ath:AT4G34630OMA:WEVVNPS
PIR:T05283Proteomes:UP000006548RefSeq:NP_195189.1STRING:3702.AT4G34630.1
TAIR:AT4G34630UniGene:At.31484UniProt:O65687
Coordinates (TAIR10) chr4:-:16537093..16537692
Molecular Weight (calculated) 21823.30 Da
IEP (calculated) 4.02
GRAVY (calculated) -0.43
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQRSRVITM SPLILDQEVD LDLWEVVNPS DGEFSDDSFS VDSLSDDDVI SLDDASFVAP SVISPPHEII PIADGGDLAV DLDGDDDVGD DVVRDEVDEN
101: DLGWSQQRMM FLGGGSGYSV GITYGDSVND DGEEDREYDD SYDLDEELVP RSVSKKVGRQ RMRKLGKRAI AKVYASKISP FLKPGIVRGK HGLGMKFKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)