AT4G34310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 734 Blast hits to 732 proteins in 187 species: Archae - 0; Bacteria - 114; Metazoa - 156; Fungi - 386; Plants - 44; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16414113..16419542 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 133461.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.11 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||
| Length | 1228 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MIRLRFNILR SSHRRLFHRL PRFFSSSSAP TNGSSGPSLN LIKPKLTPSP PPHQSRGLLR SIYTVSPSSS FSKKSVFVLS AAALSTAIAY SAVIPSDHDQ 0101: SNRSPSGNSR IYESIEDAVQ KSGNSLRRVV HHARQTGVAV SVLWQSLRSV LSSANHEVRA GFELRVAALL ADIASANAAR RAALVGAGSG AVVDWLLETV 0201: AIPGDRIGAQ DEAARALAYL IADPTVRKDA LGRPDAVPKL LKFVFSCQPK NKKHSRRSSF DISDSLKGRS MLVAAIMDIV TSNCDTIEKT PFKSSLPGNA 0301: TMRDIAAAIQ VIEEGGMYFD EPEKDDDSDD GRSGIKGIGI KILEGTTVLG LSRTSGLAPL GDLNANAGEE TPKTFALLSK HDNSSQANLS SAVIPGLWDD 0401: LHCQHVAVPF AAWALANWAM ASDTNRSHIQ ELDRDGQVVM TALMAPERTV KWHGSLVARL LLEDLKLPLS DSVSDWSSSL LATVSHASKT EDISLAQVAL 0501: SAFLVSVDRS DKAQKMVMEK GLHLMRDSAR KTRKHKAVQE GLSKALELLC AGDMHLSLEE SQKWSGILLS WVLGKVASDT VQSSARRILS RTFEDYGPHS 0601: VPISQGWLTL IMNEILNHSK TVSAKGASLP KNEKPKVDQS KVTSATQSTN LLAVAVVNLA MAQLGTVPES VNNVPLADLL LSEPFAVPIK NLKKDSPPKF 0701: NAAESALATI KAIKSLTDVC AEDSVCQNKI VDFGILCLLR RFLLSDDYEK LGAIEAYDAS RALEARDRTP DSLGESSITD IQDPCSVRVP ASAHIRRHAA 0801: RLLTILSLLP QVQKIILADE TWCKWLDDCA KGNISCCNDP KTQSYARASL LNVYCNQQDG SGSGDGGSSK PDISNMNSNC PRYGDMIFLI NPGLPHWKCH 0901: EKERQSGKKN ESSSEGEPAN VTDTVGDHVV DASNLSSSID PSSSGSHVHD PEFDVIFLHG LRGGPFKTWR IAEDKSSTKS GLVEKIDQEA GKLGTFWPSE 1001: WLSNDFPQAR LFTLKYKTNL TEWSGASLPL QEVSSMILEK LVSAGIGDRP VVFVTHSMGG LVVKQILHKA KEEKLDKLVN NTAGVVFYSC PHFGSKLADM 1101: PWRMGLVLRP APSIGELRSG SPRLVELNDL LRQLHKKGVV EVLSFCETKV TPIVEGYGGW AFRMEIVPIE SAYPGFGELV VLESTDHINS CKPLSRSDPS 1201: YTEALQFLRK LSAQRLKPHV KREPGIHD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)