AT4G33790.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.959 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Jojoba acyl CoA reductase-related male sterility protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
ECERIFERUM 4 (CER4); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, fatty-acyl-CoA reductase (alcohol-forming) activity; INVOLVED IN: microsporogenesis, wax biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Male sterility (InterPro:IPR004262), NAD(P)-binding domain (InterPro:IPR016040), Male sterility, NAD-binding (InterPro:IPR013120); BEST Arabidopsis thaliana protein match is: fatty acid reductase 1 (TAIR:AT5G22500.1); Has 2106 Blast hits to 2074 proteins in 384 species: Archae - 24; Bacteria - 471; Metazoa - 997; Fungi - 134; Plants - 291; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:16204325..16207891 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56037.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.93 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 493 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSTEMEVVSV LKYLDNKSIL VVGAAGFLAN IFVEKILRVA PNVKKLYLLL RASKGKSATQ RFNDEILKKD LFKVLKEKYG PNLNQLTSEK ITIVDGDICL 101: EDLGLQDFDL AHEMIHQVDA IVNLAATTKF DERYDVALGI NTLGALNVLN FAKRCAKVKI LVHVSTAYVC GEKSGLIMET PYRMGETLNG TTGLDINYEK 201: KLVQEKLDQL RVIGAAPETI TETMKDLGLR RAKMYGWPNT YVFTKAMGEM MVGTKRENLS LVLLRPSIIT STFKEPFPGW TEGIRTIDSL AVGYGKGKLT 301: CFLCDLDAVS DVMPADMVVN SILVSMAAQA GKQEEIIYHV GSSLRNPMKN SKFPELAYRY FSIKPWTNKE GKVVKVGAIE ILSSMRSFHR YMTIRYLIAL 401: KGLELVNIIL CKLFEKEFQY FNKKINFIFR LVDLYQPYLF FYGIFDDSNT EKLRKMVSKT GVENEMFYFD PKVLDWDDYF LNTHVIGLLK YVF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)