suba logo
AT4G32500.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.987
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : K+ transporter 5
Curator
Summary (TAIR10)
Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational
Description (TAIR10)
K+ transporter 5 (KT5); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, N-terminal protein myristoylation, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Shaker pollen inward K+ channel (TAIR:AT2G25600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1517-MONOMERBioGrid:14671eggNOG:ENOG410XPSEeggNOG:KOG0498
EMBL:AJ249479EMBL:AL034567EMBL:AL161581EMBL:CP002687
EnsemblPlants:AT4G32500EnsemblPlants:AT4G32500.1entrez:829385Gene3D:1.25.40.20
Gene3D:2.60.120.10GeneID:829385Genevisible:Q9SCX5GO:GO:0005249
GO:GO:0016021GO:GO:0042391Gramene:AT4G32500.1hmmpanther:PTHR10217
hmmpanther:PTHR10217:SF504HOGENOM:HOG000238230InParanoid:Q9SCX5InterPro:IPR000595
InterPro:IPR002110InterPro:IPR003938InterPro:IPR005821InterPro:IPR014710
InterPro:IPR018490InterPro:IPR020683InterPro:IPR021789iPTMnet:Q9SCX5
KEGG:ath:AT4G32500MINT:MINT-8066203OMA:NETDKNGPaxDb:Q9SCX5
Pfam:PF00027Pfam:PF00520Pfam:PF11834Pfam:PF12796
Pfam:PF13857Pfam:Q9SCX5Pfscan:PS50042Pfscan:PS50088
Pfscan:PS50297Pfscan:PS51490PhylomeDB:Q9SCX5PIR:F85381
PIR:T05360PRIDE:Q9SCX5PRINTS:PR01415PRINTS:PR01463
PRO:PR:Q9SCX5PROSITE:PS50042PROSITE:PS50088PROSITE:PS50297
PROSITE:PS51490ProteinModelPortal:Q9SCX5Proteomes:UP000006548Reactome:R-ATH-1296072
RefSeq:NP_194976.1SMART:SM00100SMART:SM00248SMR:Q9SCX5
STRING:3702.AT4G32500.1SUPFAM:SSF48403SUPFAM:SSF51206SUPFAM:SSF81324
TAIR:AT4G32500tair10-symbols:AKT5tair10-symbols:KT5TMHMM:TMhelix
UniGene:At.698UniProt:Q9SCX5
Coordinates (TAIR10) chr4:+:15681122..15685214
Molecular Weight (calculated) 98510.00 Da
IEP (calculated) 7.69
GRAVY (calculated) -0.03
Length 880 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIEKRKKMV WFWPEKHEGG VIKEAEDVAA EHISREGTMS HYSFSKGLLP PLGVGATARS SRHIKLRCFI VSPFDPRYRA WDWFLVILVL YTAWASPFEF
101: GFLQTPRAPL SILDNVVNGF FAVDIVLTFF VAFLDKATYL LVDDPKRIAW RYTSTWLIFD VVSTVPYELF GSLLHNTIQG YGIFSMLRLW RLHRVSKCFA
201: RLEKDRKYNY FWIRCTKLLL VSLFVVHCGA CFCYSIAAHY PDPSMTFMAL AEANWKQKSL LIRYVTAMYW SITTFSTTGY GDIHGNNAEE RAFILFYMIF
301: NLGLLAYIIG NMTNLVVHVT SRTRNFRDTI QAASAFAQRN NLPLGLQEQM VAHLSLRYRT DSEGLQQQEI IDSLPKAIRS SISHYLFYEV VDKTYLFHGI
401: SNDLLFQLVS EMKAEYFPPK EDVILRNEAP SDFYIMVTGA VDIIARVNGV DQVVGEAQTG HVFGEVGVLC YRPQLFTVRT KRLSQLLRLN RTAFLNLVQA
501: NVGDGAIIMN NLLQHLKDST DPVMKGILAE TELMLAQGKM DLPLSLCFAA ARGDDLLLHQ LLKRGSNPNE TDKNGRTALH IAASKGSQYC VVLLLEHGAD
601: PNIRDSEGSV PLWEAIIGRH EENAKLLSEN GATLSFDTVG YFSCLAVGQN NLNALKDIVK YGGDISLSDV NGTTALHRAV SEGNLEIVQF LLEKGADMDK
701: PDVYGWTARA LAEHQGHEDI KALFYNQRPV ERKTILVSGT PEIKPLMKHS SEPVMTHHHS REAMPPLARA VSQRRKLSNF KNSLFGIMSA AKTGDEGGAS
801: TRTGISEGVG GVYPARVTIS GEASSSGKVV KLPDSLEELI EIGEKKLGFV ATKILSREGA EIDDIRIIRD GDFLLLLKVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)