AT4G31910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HXXXD-type acyl-transferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2584 Blast hits to 2554 proteins in 136 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 40; Plants - 2539; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15441125..15443696 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51147.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.49 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||
| Length | 458 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPMLMATRID IIQKLNVYPR FQNHDKKKLI TLSNLDRQCP LLMYSVFFYK NTTTRDFDSV FSNLKLGLEE TMSVWYPAAG RLGLDGGGCK LNIRCNDGGA 101: VMVEAVATGV KLSELGDLTQ YNEFYENLVY KPSLDGDFSV MPLVVAQVTR FACGGYSIGI GTSHSLFDGI SAYEFIHAWA SNSHIHNKSN SKITNKKEDV 201: VIKPVHDRRN LLVNRDAVRE TNAAAICHLY QLIKQAMMTY QEQNRNLELP DSGFVIKTFE LNGDAIESMK KKSLEGFMCS SFEFLAAHLW KARTRALGLR 301: RDAMVCLQFA VDIRKRTETP LPEGFSGNAY VLASVASTAR ELLEELTLES IVNKIREAKK SIDQGYINSY MEALGGSNDG NLPPLKELTL ISDWTKMPFH 401: NVGFGNGGEP ADYMAPLCPP VPQVAYFMKN PKDAKGVLVR IGLDPRDVNG FSNHFLDC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)