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AT4G31820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phototropic-responsive NPH3 family protein
Curator
Summary (TAIR10)
A member of the NPY family genes (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Encodes a protein with similarity to NHP3. Contains BTB/POZ domain. Promoter region has canonical auxin response element binding site and Wus binding site. Co-localizes to the late endosome with PID. Regulates cotyledon development through control of PIN1 polarity in concert with PID. Also involved in sepal and gynoecia development.
Computational
Description (TAIR10)
ENHANCER OF PINOID (ENP); FUNCTIONS IN: signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: late endosome, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67440.1); Has 898 Blast hits to 870 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 2; Plants - 875; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFWReggNOG:ENOG410YA9JEMBL:AL049607EMBL:AL161579
EMBL:AY091021EMBL:AY150514EMBL:CP002687EnsemblPlants:AT4G31820
EnsemblPlants:AT4G31820.1entrez:829311GeneID:829311Genevisible:Q8H1D3
GO:GO:0004871GO:GO:0005770GO:GO:0005886GO:GO:0009908
GO:GO:0009911GO:GO:0010229GO:GO:0010540GO:GO:0016567
GO:GO:0045176GO:GO:0048513GO:GO:0048825GO:GO:0048827
Gramene:AT4G31820.1hmmpanther:PTHR32370hmmpanther:PTHR32370:SF7HOGENOM:HOG000239180
InParanoid:Q8H1D3InterPro:IPR000210InterPro:IPR011333InterPro:IPR027356
InterPro:IPR029961iPTMnet:Q8H1D3KEGG:ath:AT4G31820OMA:VVWSYTY
PANTHER:PTHR32370:SF7PaxDb:Q8H1D3Pfam:PF00651Pfam:PF03000
Pfam:Q8H1D3Pfscan:PS50097Pfscan:PS51649PhylomeDB:Q8H1D3
PIR:T06304PRIDE:Q8H1D3PRO:PR:Q8H1D3PROSITE:PS50097
PROSITE:PS51649ProteinModelPortal:Q8H1D3Proteomes:UP000006548RefSeq:NP_194910.2
SMART:SM00225STRING:3702.AT4G31820.1SUPFAM:SSF54695TAIR:AT4G31820
tair10-symbols:ENPtair10-symbols:MAB4tair10-symbols:NPY1UniGene:At.43160
UniPathway:UPA00143UniProt:Q8H1D3
Coordinates (TAIR10) chr4:-:15390788..15393627
Molecular Weight (calculated) 64405.20 Da
IEP (calculated) 7.37
GRAVY (calculated) -0.31
Length 571 amino acids
Sequence (TAIR10)
(BLAST)
001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)