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AT4G28350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.894
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 17317660
TAIR : plasma membrane 17317660
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Concanavalin A-like lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G04960.1); Has 117572 Blast hits to 116208 proteins in 4641 species: Archae - 127; Bacteria - 13536; Metazoa - 42743; Fungi - 9918; Plants - 33874; Viruses - 420; Other Eukaryotes - 16954 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G28350-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410J95M
EMBL:AL021749EMBL:AL161572EMBL:CP002687EnsemblPlants:AT4G28350
EnsemblPlants:AT4G28350.1entrez:828950Gene3D:2.60.120.200GeneID:828950
Genevisible:O49445GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0016021GO:GO:0030246Gramene:AT4G28350.1hmmpanther:PTHR27007
hmmpanther:PTHR27007:SF9InParanoid:O49445InterPro:IPR000719InterPro:IPR001220
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
KEGG:ath:AT4G28350PaxDb:O49445Pfam:O49445Pfam:PF00069
Pfam:PF00139Pfscan:PS50011PhylomeDB:O49445PIR:T04606
PRO:PR:O49445PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:O49445Proteomes:UP000006548RefSeq:NP_194564.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:O49445STRING:3702.AT4G28350.1
SUPFAM:SSF49899SUPFAM:SSF56112TAIR:AT4G28350UniGene:At.32024
UniProt:O49445
Coordinates (TAIR10) chr4:+:14026577..14028622
Molecular Weight (calculated) 72069.70 Da
IEP (calculated) 6.22
GRAVY (calculated) -0.17
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSKVSILLF SLASLLLFRS TTGIEFIYNS NFTTTNTLLL GNATVKSPPS ILTLTNQTTF SIGRGLYPSR INASSSSASP LPFATSFIFS MAPFKHLSPG
101: HGFAFVFLPF SETSAASSSQ HLGLFNFTNN GDPNSRIFAV EFDVFANQEF NDINDNHVGV DVNSLTSVAS ETAGFYGGRD GQRFTELKLN SGENYQAWIE
201: FNGSAINVTM ARASSRKPIR PLISIPLNLT GVLLDDMFVG FTASTGQLVQ SHRILSWSFS NSNFSIGDSV LKSKGFIAGV SSGVVLQRLE GDVEDWETEY
301: WPHRVQYKDV LEATKGFSDE NMIGYGGNSK VYRGVLEGKE VAVKRIMMSP RESVGATSEF LAEVSSLGRL RHKNIVGLKG WSKKGGESLI LIYEYMENGS
401: VDKRIFDCNE MLNWEERMRV IRDLASGMLY LHEGWETKVL HRDIKSSNVL LDKDMNARVG DFGLAKLQNT SKEMVSTTHV VGTAGYMAPE LVKTGRASAQ
501: TDVYSFGVFV LEVVCGRRPI EEGREGIVEW IWGLMEKDKV VDGLDERIKA NGVFVVEEVE MALRIGLLCV HPDPRVRPKM RQVVQILEQG RLVEDGGERE
601: ISLLERVKSS YLLETGEGSR QQHPTFQDVW NSSSYSNSFQ TYDSILHGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)