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AT4G28150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF789)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT4G03420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:828930eggNOG:ENOG410JTUVeggNOG:ENOG41107HMEMBL:BT002353
EMBL:CP002687EnsemblPlants:AT4G28150EnsemblPlants:AT4G28150.1entrez:828930
ExpressionAtlas:Q8GUN3GeneID:828930Gramene:AT4G28150.1hmmpanther:PTHR31343
hmmpanther:PTHR31343:SF3HOGENOM:HOG000237909IntAct:Q8GUN3InterPro:IPR008507
KEGG:ath:AT4G28150OMA:SEEWRWEPfam:PF05623PhylomeDB:Q8GUN3
Proteomes:UP000006548RefSeq:NP_567798.1TAIR:AT4G28150UniGene:At.32041
UniProt:Q8GUN3
Coordinates (TAIR10) chr4:-:13977642..13978912
Molecular Weight (calculated) 33296.10 Da
IEP (calculated) 4.85
GRAVY (calculated) -0.39
Length 285 amino acids
Sequence (TAIR10)
(BLAST)
001: MMVFDSESNL DRFLRCTTPI VPAYSLPKTQ IKNLNPLWYP LESQSVEYFR LGDFWDCFDE WSAYGAGVPI VSETGETLVQ YYVPYLSAIQ IFTSHSVINT
101: LREETESGDS GSESCSEEWR WEGCSSSEEG FDHQEPLDRL GYSYLQYFER CTPYSRVPLM DKIKELGERY VGLRSLRSVD LSPASWMAVA WYPIYHIPMN
201: RSIKDLSTCF LTYHTLSSSF QDVKREEEKE RISVSAFGMA TYKMQGRLWD NDRLLCFLSV ADSWLKQLRV HHHDFTYFTT TTHYL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)