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AT2G18890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.883
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 110693 Blast hits to 109654 proteins in 4007 species: Archae - 94; Bacteria - 12578; Metazoa - 40858; Fungi - 8843; Plants - 32118; Viruses - 387; Other Eukaryotes - 15815 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G18890-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AC003673
EMBL:BT015321EMBL:BT015853EMBL:CP002685EnsemblPlants:AT2G18890
EnsemblPlants:AT2G18890.1entrez:816405ExpressionAtlas:O64619Gene3D:2.60.120.200
GeneID:816405GO:GO:0004674GO:GO:0005524Gramene:AT2G18890.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF34HOGENOM:HOG000116550InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
OMA:EDLECECPfam:PF00069Pfscan:PS50011PhylomeDB:O64619
PIR:T01617PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_179479.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:O64619STRING:3702.AT2G18890.1SUPFAM:SSF56112
TAIR:AT2G18890UniGene:At.39926UniProt:O64619
Coordinates (TAIR10) chr2:+:8184027..8186685
Molecular Weight (calculated) 44535.60 Da
IEP (calculated) 5.90
GRAVY (calculated) -0.44
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MKYIRSNSLK RLFSFKRRSF DSDSSENSSP LAASSTKCVE GFQETDQFQR PKWKCFSFQE IYDATNGFSS ENLVGRGGFA EVYKGILGKN GEEIAVKRIT
101: RGGRDDERRE KEFLMEIGTI GHVSHPNVLS LLGCCIDNGL YLVFIFSSRG SLASLLHDLN QAPLEWETRY KIAIGTAKGL HYLHKGCQRR IIHRDIKSSN
201: VLLNQDFEPQ ISDFGLAKWL PSQWSHHSIA PIEGTFGHLA PEYYTHGIVD EKTDVFAFGV FLLELISGKK PVDASHQSLH SWAKLIIKDG EIEKLVDPRI
301: GEEFDLQQLH RIAFAASLCI RSSSLCRPSM IEVLEVLQGE DIEKEKWKME EEEEVKEEFW GYEDLEDCEC DSSISLSPPD SISNRSSSHR SR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)