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AT2G44740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin p4;1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).
Protein Annotations
BioGrid:4418eggNOG:ENOG4111TTKeggNOG:KOG1674EMBL:AC003672
EMBL:AK229380EMBL:BT021978EMBL:BT023473EMBL:CP002685
EnsemblPlants:AT2G44740EnsemblPlants:AT2G44740.1entrez:819082Gene3D:1.10.472.10
GeneID:819082Genevisible:O80513GO:GO:0000079GO:GO:0007049
GO:GO:0051301Gramene:AT2G44740.1hmmpanther:PTHR15615hmmpanther:PTHR15615:SF28
HOGENOM:HOG000239309InParanoid:O80513IntAct:O80513InterPro:IPR012389
InterPro:IPR013763InterPro:IPR013922KEGG:ath:AT2G44740OMA:NGRFQPQ
PaxDb:O80513Pfam:O80513Pfam:PF08613PhylomeDB:O80513
PIR:T01601PIRSF:PIRSF027110PRIDE:O80513PRO:PR:O80513
ProteinModelPortal:O80513Proteomes:UP000006548RefSeq:NP_182002.1SMR:O80513
STRING:3702.AT2G44740.1SUPFAM:SSF47954TAIR:AT2G44740tair10-symbols:CYCP4;1
UniGene:At.23538UniProt:O80513
Coordinates (TAIR10) chr2:-:18442287..18443304
Molecular Weight (calculated) 23044.70 Da
IEP (calculated) 7.56
GRAVY (calculated) 0.01
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MAELENPSVM SKLIAFLSSL LERVAESNDL TRRVATQSQR VSVFHGLSRP TITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVAAKF LDDLYYNNAY YAKVGGISTK EMNFLELDFL FGLGFELNVT PNTFNAYFSY LQKEMTLLQP LSLVVVPSSR SLITFNDDEA SHQKQQQQQL
201: AV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)