AT4G28070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AFG1-like ATPase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AFG1-like ATPase family protein; FUNCTIONS IN: ATPase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AFG1-like (InterPro:IPR005654); BEST Arabidopsis thaliana protein match is: AFG1-like ATPase family protein (TAIR:AT4G30490.1); Has 4088 Blast hits to 4073 proteins in 1161 species: Archae - 0; Bacteria - 2068; Metazoa - 141; Fungi - 206; Plants - 104; Viruses - 0; Other Eukaryotes - 1569 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13946009..13948462 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52209.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.10 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||
| Length | 464 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLLLLSLRR VTLFSRHQRY AFAPIHNCLI SINPSTSSSS LFSASSFCSS PHSNGDGKIA GPLVEYERRI VAGELLDGDL CQLGTLRELQ RLYDELVQSA 101: DACRLDRYSA SAKSTRSNWF WNKFVSHSSV SPVKGLYLYG GVGTGKTMLM DLFFHQLPAS WRTQRIHFHN FMLSVHSRLQ KHKGLEDPLE VVGLEIADEA 201: ILLCLDEFMV NDVADALILN RLFRHLFNNG IILVATSNRA PDNLYEGGLQ RDLFLPFIST LKERCVVREI GSSVDYRKLT SAEEGFYFIG KDISGLLKQK 301: FQLLVGDQPA GPQVVEVVMG RKLQVPLAAD GCAYFLFEEL CDRPLGAADY LGLFSVPFFG LHNRTAAYRF VTLVDVMYEN KARLLCTAEG SPLELLERIV 401: TISDAQQIAP RTSSRSRKSD DPDLCVDNEL GFAKDRTISR LTEMNSKEYL EQHSRMLQEK QPSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)