AT4G27820.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.806 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : beta glucosidase 9 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
beta glucosidase 9 (BGLU9); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 11131 Blast hits to 10798 proteins in 1457 species: Archae - 142; Bacteria - 7630; Metazoa - 718; Fungi - 199; Plants - 1452; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:13857873..13860571 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56895.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.45 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 506 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKHFSLLFIF LVILLATSYS DAFTRNSFPK DFLFGAATSA YQWEGAVAED GRTPSVWDTF SNSYDTGNGD VTSDGYHKYK EDVKLMATMG LESFRFSISW 101: SRLIPNGRGL INPKGLLFYN NLIKDLKSHG IEPHVTLYHY DLPQSLEDEY GGWINRKIIE DFTAYADVCF REFGEDVKLW TTINEATIFA IGSYDQGTAP 201: PGHCSPNKFV NCSTGNSSTE PYIAGHNILL AHASASKLYK LKYKSKQKGS IGLSIFAFGL SPYTNSKDDE IATQRAKTFL YGWMLKPLVF GDYPDEMKKT 301: VGSRLPVFSE EESEQVKGSS DFIGIIHYTT FYVTNHQPSA SLFPSMGEGF FKDMGVYIIP TGNSSFLVWE ATPWGLEGIL EYIKQSYNNP PVYILENGMP 401: MVRDSTLQDT QRIEYIQAYI DAVLNAMKNG SDTRGYFVWS MVDVYEILSG YTTSFGMYHV NFSDPGRKRT PKLSASWYTG FLNGTIDVAS QDTIQLWSNF 501: SVSSSL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)