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AT1G78995.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0DHeggNOG:ENOG41124KJEMBL:AY086684EMBL:AY136465
EMBL:BT006542EMBL:CP002684EnsemblPlants:AT1G78995EnsemblPlants:AT1G78995.1
entrez:844240GeneID:844240Gramene:AT1G78995.1hmmpanther:PTHR36006
hmmpanther:PTHR36006:SF2KEGG:ath:AT1G78995OMA:EANRIRHPhylomeDB:Q8L5A1
Proteomes:UP000006548RefSeq:NP_565196.1STRING:3702.AT1G78995.1TAIR:AT1G78995
UniGene:At.34197UniProt:Q8L5A1
Coordinates (TAIR10) chr1:-:29715433..29716079
Molecular Weight (calculated) 17159.70 Da
IEP (calculated) 9.05
GRAVY (calculated) -0.26
Length 159 amino acids
Sequence (TAIR10)
(BLAST)
001: MIIHCPSSSL YRAKLLYNRG SSKSHQCQCQ SRLVTRSAAV RISTATIGAI AAAVMMAAVS VASAELPPPP QDGETLSNVP QTLSGEDCKK QRIQRPKSKN
101: AEKCTVKCVN TCIRSGDGEG PINIRRPLVV FKQGFRSRNY CLVECSDICN LIGDGDYGP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)