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AT4G27595.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF827)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G65010.1); Has 310032 Blast hits to 139242 proteins in 3916 species: Archae - 4716; Bacteria - 75781; Metazoa - 114609; Fungi - 21186; Plants - 16814; Viruses - 1394; Other Eukaryotes - 75532 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKUHeggNOG:ENOG410Y9W9EMBL:AL035602EMBL:CP002687
EnsemblPlants:AT4G27595EnsemblPlants:AT4G27595.1entrez:828870GeneID:828870
GO:GO:0005875GO:GO:0009507Gramene:AT4G27595.1hmmpanther:PTHR23160
InParanoid:F4JJP1KEGG:ath:AT4G27595ncoils:CoilOMA:LENCKKE
PaxDb:F4JJP1Pfam:F4JJP1PhylomeDB:F4JJP1PRIDE:F4JJP1
PRO:PR:F4JJP1ProteinModelPortal:F4JJP1Proteomes:UP000006548RefSeq:NP_680744.4
TAIR:AT4G27595UniGene:At.54528UniProt:F4JJP1
Coordinates (TAIR10) chr4:-:13772819..13777128
Molecular Weight (calculated) 138960.00 Da
IEP (calculated) 4.74
GRAVY (calculated) -0.88
Length 1221 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASRTKTGLM ETPRSKPSPP TPRVSKPTVT KSDGNSPSPV QSTRLSIDRS PQTVNSKPVS DRRTARVPTP PEANYFLIII CMAFQKSQSR LGKGTGLLVQ
0101: QTQEDLRKAN EQIERLKKDK AKALDDLKES EKLTKEANEK LREALAAQHH AEKSSEIEKF RAVELEQAGI EAVHKKEVSW KKEVESIRSQ HALDISALLS
0201: TTEELHRIKQ ELAMTADAKN KALSHAEEAT KIAENQAEKA EILSSELSRL KALVGSDEQK KSNEDDEVVS KLKSEIEMLR GKLEKVSILE NTLKDQEESI
0301: ELLHVDLQAA KMVESYANNL AAEWKNEVDK QVEESKELKT SASESLDLAM KQLEENNHAL HEAELGNATL KEKVESLVTT IGRQENDLEE SQHQVCISKE
0401: ETSKLEKLVE SIKSDLETTQ GEKVRALLNE KTATSQIQNL LSEKTELATE LENCKKEEEK IKKAMESLTL DLQEVSVEAK EAKEKLLTCQ AELELCGVQI
0501: ESLKLAEKDT NEKHGKMLED ARNEIDGLKS SLENTENEFF NSKTEWEQRE LHLMLCVKKL EDGNFSVQEE LSKVKNLLHL KEVEACAAKE EDAKMQTNRK
0601: ELEEEIKDLQ EIVEVAKADS MKLKESLVEK EDELKNTAAE NRKLREMEVS SIDKIDQLSK VKESLVDKET KLQNIIQEAE ELRVKEIDYL KKIEELSAAK
0701: ESLVEKETKL LSTVQEAEEL RRRELACLKK IEELSAVNER LVDKETKLQS SIQEVEVLKE REAENIKQIE ELSLSNERLV EKEAKLQTVV QENEELREKE
0801: SAYQKKIEEL SKVDEIFADR EAKLQSSTQE NEELREREVA YLKKIEELAK LQENLLDKEN ELHDMVLEIE DLKAKDSLAE KKIEELSNLN KSLLVKESEL
0901: QDVVFENEKL KSKEALSLKT TEELSDVKQT LADKEKELKT AVVENEKLKA QAASSFQKIE ELKNLKQSLL DKENELEGVF QANEELKAKE ASSLKKIDEL
1001: LHLEQSWIDK GNENQELKVR EASAAKRIEE LSKMKESLLD KELQTVIHDN YELKAREASA LKKIEELSKL LEEASSTHEK GEEITNTNPF DNSTGEQKVQ
1101: ESPLEAIDRH LKDDTTIHWS AHNVQVIGKG EKGKDKDTVE SEVYHLEKRE ASSERDTEHD FAEEEVDSKA EGSENFDQLS NGLSLAEQTE DVVSKDQQQK
1201: KKKPLLRKFG NLLKKKSSSQ K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)