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AT4G26910.3
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Dihydrolipoamide succinyltransferase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT5G55070.1); Has 24826 Blast hits to 20752 proteins in 2368 species: Archae - 154; Bacteria - 14691; Metazoa - 760; Fungi - 487; Plants - 406; Viruses - 4; Other Eukaryotes - 8324 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G26910EnsemblPlants:AT4G26910.3entrez:828798gramene_pathway:2.3.1.61
gramene_pathway:PWY-5084hmmpanther:PTHR23151hmmpanther:PTHR23151:SF8KEGG:00020+2.3.1.61
KEGG:00310+2.3.1.61Pfam:PF00198Pfam:PF00364Pfscan:PS50968
scanprosite:PS00189SUPFAM:SSF52777TIGRfam:TIGR01347unipathway:UPA00868
Coordinates (TAIR10) chr4:-:13520127..13522055
Molecular Weight (calculated) 39704.90 Da
IEP (calculated) 7.79
GRAVY (calculated) -0.28
Length 365 amino acids
Sequence (TAIR10)
(BLAST)
001: MGESITDGTL ATFLKKPGER VQADEAIAQI ETDKVTIDIA SPASGVIQEF LVNEGDTVEP GTKVAIISKS EDTASQVTPS QKIPETTDTK PSPPAEDKQK
101: PRVESAPVAE KPKAPSSPPP PKQSAKEPQL PPKERERRVP MTRLRKRVAT RLKDSQNTFA LLTTFNEVDM TNLMKLRSQY KDAFYEKHGV KLGLMSGFIK
201: AAVSALQHQP VVNAVIDGDD IIYRDYVDIS IAVGTSKGLV VPVIRGADKM NFAEIEKTIN SLAKKANEGT ISIDEMAGGS FTVSNGGVYG SLISTPIINP
301: PQSAILGMHS IVSRPMVVGG SVVPRPMMYV ALTYDHRLID GREAVYFLRR VKDVVEDPQR LLLDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)